KEGG   Variovorax sp. W6: SFB74_29770
Entry
SFB74_29770       CDS       T11181                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
vaw  Variovorax sp. W6
Pathway
vaw00061  Fatty acid biosynthesis
vaw00071  Fatty acid degradation
vaw01100  Metabolic pathways
vaw01212  Fatty acid metabolism
vaw02024  Quorum sensing
vaw04146  Peroxisome
Module
vaw_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:vaw00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    SFB74_29770
   00071 Fatty acid degradation
    SFB74_29770
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    SFB74_29770
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SFB74_29770
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:vaw01004]
    SFB74_29770
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vaw04147]
    SFB74_29770
Enzymes [BR:vaw01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     SFB74_29770
Lipid biosynthesis proteins [BR:vaw01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   SFB74_29770
Exosome [BR:vaw04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   SFB74_29770
  Exosomal proteins of breast cancer cells
   SFB74_29770
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: XVK58280
LinkDB
Position
complement(6502781..6504394)
AA seq 537 aa
METLPDRPQQPLHEYLRAHARERGDSPACIWYGHSMSWSELDRASDAFAARLQALGVKKG
EPVVLFLNNCPQYLVAHFGIQKIGAIVCPSGPLNKEHELAYQVNDLKARVIVAAAPLLPV
VRKVQPESSLEHVFVVHYADLLPDPASLDLPAELAAERKAGRATAEGCEDFLAAMRGNAK
PQSVAIGMDDVALMTYTSGTTGLPKGAMLSYGNALFKTRAAADCNGVGPADVLLSIAPLY
HIAGMLMGVNVPVLTGAASVLLHRFDPRAALQAIAAYKVSWWYSIAPMNVACMQVPDIAG
FDLSSLKMNPVTSFGITFTEPLAQQWRSHAPNCTSFEAAYGLSETHTCDTYTPHHAPRWG
TQGVAVPGVTIRIIDTDTQADMPAGEVGEIVLTSPGTFKGYWNKPEATAATLRNGWVHTG
DMGKIDADGYLTFIGRFKEMIKVSGYSVFPEEVETILIKHPAVAQAAVIAQPDAEKGEVV
KAFIVRKPGAALEADVLIAWSRDNMASYKAPRSVSFIDALPTTGAGKVLRRLLKDKS
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggagacattgcccgaccgcccgcagcagcccctgcacgaatacctgcgcgcccacgcg
cgagagcgcggcgacagccccgcctgcatctggtacgggcactcgatgagctggagcgag
ctcgaccgcgccagcgacgccttcgcggcgcgcctgcaggcgctgggcgtgaagaagggc
gaaccggtggtgctcttcctcaacaactgcccgcagtacctggtggcgcacttcggcatc
cagaagatcggcgccatcgtctgcccgagcggcccgctcaacaaggagcacgagctggcc
taccaggtcaacgacctgaaggcgcgcgtgatcgtcgccgccgcgccgctgctgccggtg
gtgcgcaaggtgcagccagagagctcgctcgaacacgtgttcgtggtgcactacgcggac
ctgctgcccgatccggcatcgctggacctgccggcggaactcgccgccgaacgcaaggcc
gggcgcgcaacggccgaaggctgcgaagacttcctcgccgcgatgcgcggcaacgcgaag
ccgcagtccgtggccatcggcatggacgacgtggcgctcatgacctacacctcgggcacc
accggcctgcccaagggcgcgatgctgagctacggcaacgcgctcttcaagacgcgcgcc
gccgccgactgcaacggcgtgggccccgccgacgtgctgctgtccatcgcgccgctgtat
cacatcgcgggcatgctcatgggcgtgaacgtgccggtgctcaccggcgcggcctcggtg
ctgctgcaccgcttcgatccgcgcgccgcgctgcaggccattgccgcttacaaggtgagc
tggtggtacagcatcgcgccgatgaacgtggcctgcatgcaggtgccggacatcgccggg
ttcgacctgtcgagcctgaagatgaacccggtgaccagcttcggcatcaccttcaccgag
ccgctggcgcagcagtggcgctcgcacgcgcccaactgcacatctttcgaggccgcctac
ggcctgagcgagacccacacctgcgacacctacacgccgcatcacgcgccgcgctggggc
acgcagggcgtggcggtgccgggcgtgacgatccggatcatcgacaccgatacgcaggcc
gacatgcccgcgggcgaggtcggcgagatcgtgctcaccagccccggcaccttcaagggc
tactggaacaagcccgaggccacggccgccacgctgcgcaacggctgggtgcacacgggc
gacatgggcaagatcgacgccgacggctacctgaccttcatcggccgcttcaaggaaatg
atcaaggtctcgggctacagcgtgttcccggaggaggtcgagaccattctcatcaagcat
ccggcggtggcgcaggccgcagtcatcgcgcagcccgatgcggagaaaggcgaggtcgtg
aaggcgttcatcgtgcgcaagcccggcgcggcgctcgaagccgatgtgctcatcgcctgg
tcgcgcgacaacatggcgagctacaaggcgccgcgttcggtgagcttcatcgacgcactg
cccacgaccggcgcgggcaaggttctgcgtcgcctgctcaaagacaaaagctga

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