Variovorax sp. W6: SFB74_30550
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Entry
SFB74_30550 CDS
T11181
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
vaw Variovorax sp. W6
Pathway
vaw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SFB74_30550 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vaw03011
]
SFB74_30550 (rpsC)
Ribosome [BR:
vaw03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SFB74_30550 (rpsC)
Bacteria
SFB74_30550 (rpsC)
Archaea
SFB74_30550 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
ParB_dimer
Motif
Other DBs
NCBI-ProteinID:
XVK58425
LinkDB
All DBs
Position
complement(6654841..6655755)
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AA seq
304 aa
AA seq
DB search
MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP
AKNARITIFSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI
TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA
DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPAVETPRPEEERRPRGPRRDGRPGGDR
PGSDRRGPGPRAGARGPIGGNTAPADGSDKPAEATGGAGADSKPAVKRVRKAAPAAAADG
AKTE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaaaatccacccaaccgggttccgccttgcggtcacccgtaactggtccagc
cgttggtacgcaagcgaccgcgatttcgcgggcatgctggccgaagacatcaaggttcgc
gaatacctgaagaagaagctgaagaacgcttcggtttcgcgcgtcatgatcgagcgtccc
gccaagaacgcacgcatcacgatcttctcggctcgtccgggcgtcgtgatcggcaagaag
ggcgaagacatcgagaacctcaagcgcgaactgggcaagcagctcggcgtgccggttgcg
gtcaacatcgaagaagtgcgcaagcccgaaatcgatgcgcagctgatcgccgacagcatc
acgcagcagctcgaaaagcggatcatgttccgccgcgccatgaagcgcgccatgcagaac
gccatgcgtctgggtgccctgggcatcaagatcatgtcggctggccgcctgaacggcatc
gaaatcgcacgtaccgagtggtaccgcgaaggccgcgtgccgctgcacaccctgcgcgcc
gacatcgactacggcacctcggaagccaagaccacctacggcgtcatcggcgtcaaggtc
tgggtctacaagggcgacacgctgggtcgtaacgacctgccggccgtcgagacgccgcgt
cctgaagaagaacgtcgtccgcgcggtccccgccgtgatggccgccccggtggcgaccgt
ccgggcagcgaccgtcgtggccccggcccccgcgccggtgcccgtggcccgatcggtggc
aacaccgctcccgccgatggcagcgacaagcccgcagaagcaaccggcggtgccggtgca
gactcgaaacccgccgttaagcgcgtccgcaaagccgcgcccgctgcagcagcggacggt
gccaagaccgagtaa
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