Variovorax sp. W6: SFB74_30840
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Entry
SFB74_30840 CDS
T11181
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vaw Variovorax sp. W6
Pathway
vaw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFB74_30840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_30840
Transporters [BR:
vaw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SFB74_30840
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
AAA_29
ABC_ATPase
AAA_25
AAA_22
RsgA_GTPase
nSTAND1
AAA_33
nSTAND_NTPase5
AAA_16
AAA_23
MMR_HSR1
NACHT
AAA_18
AAA_14
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
XVK58480
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Position
6708746..6709774
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AA seq
342 aa
AA seq
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MSLLLDNVSYNYPGSTHGLHDVSLDVRTGELVAVIGPSGSGKSTLLKLVSGLETGHTGRI
ALDGEDMSRTPVHQRHIGMVFQSYALFPHLSVLDNVAYGLKLRKVATAERRQRAQELLDI
VGLGEFSQRAVAQLSGGQQQRVALARALAIDPRALLLDEPLSALDASVRGHLRDQIRAIQ
QRFNATTLLVTHDQEEALAMADRVAMLKDGRLLQIATPRDIYENPASRAVAEFVGLSTIL
PAKVAAPGRLDMGFAELFADTGQRAFGTAVHVLVRPEHIRTDPATDAVNRLAGRTGAQRY
LGALTRYDFEVPGAGKPFLAESAMPAAEAIAIAPEHLRLLDN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctcctcgacaacgtcagctacaactaccccggcagcacgcacggactgcat
gacgtgtcgctcgacgtgcgcaccggcgaactggttgcggtgatcgggcccagcggctcg
ggcaagtcgacgctgctgaagctggtgtctgggctggagacgggccacaccggccgcatc
gcgctcgacggcgaagacatgtcgcgcacgccggtgcaccagcgccacatcggcatggtg
ttccagagctacgcgctctttccgcacctgagcgtgctcgacaacgtggcctacggcctc
aagctgcgcaaggtggcgaccgccgagcggcgccagcgcgcgcaggaactgctcgacatc
gtcgggctgggcgagttctcgcagcgcgccgtggcgcagctctcgggcgggcagcagcag
cgcgtggcgctggcccgcgcactggccatcgacccgcgcgccctgctgctcgacgagccg
ctctcggccctcgacgccagcgtgcgcggccacctgcgcgaccagatccgcgccatccag
cagcgcttcaacgccaccacgctgctggtcacgcacgaccaggaagaagcgctggccatg
gccgaccgcgtcgccatgctcaaggacggccggctgctgcagatcgccacgccgcgcgac
atctacgagaaccccgcgagccgcgcggtggcggagttcgtcgggctctcgacgatcctg
cccgcgaaggtggccgcacccggccggctggacatgggcttcgccgaactcttcgccgac
accgggcagcgcgccttcggcaccgcggtgcacgtgctggtgcggcccgagcacatccgg
accgacccggcgaccgacgccgtgaaccgcctcgcgggccgcaccggcgcgcagcgctac
ctgggcgcgctcacgcgctacgacttcgaagtgccgggcgctggcaagcccttcctcgcc
gaatcggcgatgccggcggcggaagccatcgccatcgcgccggagcacctgcgcctgctc
gacaactga
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