Variovorax sp. W6: SFB74_31205
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Entry
SFB74_31205 CDS
T11181
Name
(GenBank) MexW/MexI family multidrug efflux RND transporter permease subunit
KO
K18307
multidrug efflux pump
Organism
vaw Variovorax sp. W6
Pathway
vaw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vaw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SFB74_31205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vaw02000
]
SFB74_31205
Transporters [BR:
vaw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SFB74_31205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XVK58551
LinkDB
All DBs
Position
6783502..6786582
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AA seq
1026 aa
AA seq
DB search
MKFTDLFVRRPVLALVVSTLILLLGARALGDLPVRQYPLTESTTLTITTQYPGASPELMQ
GFVTQPIAQAVATIENVDYLSSSSTLGRSVISVRMKLNADANQALTQAMAQVSQVKYRLP
AEAFDPVILKSSGEATAVAYVGFSSKTMPMPALTDYLSRVVQPQFASITGVSGVEVSGGQ
TLAMRVWLDPNRMAARGISAGELADALRQNNVQAAPGQVKGLYVVSNIRVNTDLVNVAEF
RDMVVKREGDAIVRLGDVATVELGAASADSSATMDGVPAIYLGLQAAPNGNPLVIVKRIR
ELLPGIKQNLPPGVEVQLPFELARFIEASIDEVRHTLLEAIAIVVIVIFLCLGSVRAVLI
PVVTIPLSMLGAAALMLLFGFSINLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSRV
QAALIGAREVAGPVIAMTLTLAAVYAPIGLMGGLTGSLFKEFAFTLAGAVVVSGVIALTL
SPVMSSFLLPQDATGSRMARAAESFFHRLATGYGKLLDVSLHHRWATGIFAALVLASLPF
LYNAAQRELAPGEDQAMVLTAIKSPQHANIDYVEKFGKKWDDVFASLPENTGRWLINGSD
GVSNSIGGVQLSDWKDRKRNADQIQGDTQGRMNEVEGSSVFAFQLPSLPGSTGGLPVQMV
IRSAGDHRTVFEAMEALKKSARDSGKFIVVDSDLEFNNPTVEIRVDRAKANSMGVTMKSI
GDTLAVLVGENYVNRFGMDGRSYDVIPQSPREQRLTAEALSRYFVKSASGQPVPLANLVQ
LSTSVGPNKLTQFNQLNAATFQAIPAPGVTMGDAVAFLSEEAKKLPAGFSYDWQSDARQF
TQEGSALVMAFVFAIVVIYLVLAAQYESLRDPLIILISVPMSICGALVPLALGFGTINIY
TQIGLVTLIGLISKHGILMVEFANEIQMNKGLDRRSSIEEAARIRLRPILMTTAAMVVGL
VPLLFASGAGANSRFSIGLVIVVGMLVGTLFTLFVLPTMYTLLARDHRAEGRSQRAAELE
ALSEGA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccgacctcttcgtgcgccggcccgtgctggcgctggtggtgagcacgctc
atcctgctgctgggcgcgcgcgccctgggcgacctgccggtgcggcagtacccgctgacc
gagagcaccacgctcaccatcaccacgcagtaccccggcgcctcgccggagctgatgcag
ggcttcgtgacgcagccgatcgcgcaggcggtggcgaccatcgagaacgtcgactacctc
tcgtcctcgtccacgctgggccgcagcgtgatcagcgtgcgcatgaagctcaacgccgac
gccaaccaggcgctcacgcaggcgatggcacaggtcagccaggtgaagtaccggctgccg
gccgaggccttcgacccggtgatcctgaagtcgtcgggcgaggcgacggccgtggcctac
gtgggcttctccagcaagacgatgccgatgccggcgctcaccgactatctctcgcgcgtg
gtgcagccgcagttcgcctccatcacgggcgtctcgggcgtggaagtatcgggcgggcag
acgctggcgatgcgcgtgtggctcgaccccaaccgcatggccgcgcgcggcatctcggcc
ggcgagctggccgacgcgctgcgccagaacaacgtgcaggccgcgcccgggcaggtgaag
ggcctgtacgtggtgtcgaacatccgtgtgaacaccgacctggtgaacgtggctgagttc
cgcgacatggtcgtcaagcgcgagggtgacgccatcgtgcgcctgggcgacgtggccacc
gtggaactcggcgcggccagcgccgacagcagcgcgaccatggacggcgtgcccgccatc
tacctcggcctgcaggccgcacccaacggcaacccgctggtgatcgtgaagcgcatccgc
gaactgctgcccggcatcaagcagaacctgccgcctggcgtggaggtgcaactgcccttc
gagctggcccgcttcatcgaggcttccatcgacgaggtgcgccacacgctgctcgaagcc
atcgccatcgtggtgatcgtgatcttcctgtgcctgggctcggtgcgcgcggtgctgatt
ccggtggtgaccattccgctgtcgatgctgggcgccgccgcgctgatgctgctgttcggc
ttcagcatcaacctgctgaccttgctggcgatggtgctggccatcgggctggtggtggac
gacgccatcgtggtggtggagaacgtgcaccgccacatcgaggaaggcaagtcgcgcgtg
caggccgcattgatcggcgcgcgcgaggtggccggcccggtgatcgcgatgacgctcacg
ctggccgcggtgtacgcacccatcggcctcatgggcgggctcacgggttcgctcttcaag
gagttcgccttcacgctggcgggcgcggtggtggtgtcgggcgtgatcgcgctcacgctg
tcgccggtgatgagctcgttcctgctgccgcaggacgcaacgggcagccgcatggcgcgc
gccgccgagagcttcttccaccgcctggccacgggctacggcaagctgctggacgtgtcg
ctgcaccaccgctgggcgaccggcatcttcgcggcgctggtgctggcgagcctgcccttc
ctctacaacgcggcgcagcgcgagctggcgcccggcgaggaccaggccatggtgctcacg
gccatcaagtcgccgcagcacgccaacatcgactacgtcgagaagttcggcaagaagtgg
gacgacgtgttcgcctcgctgcccgagaacaccggccgctggctcatcaacggctccgac
ggcgtctccaacagcatcggcggcgtgcagctgtccgactggaaggaccgcaagcgcaat
gccgaccagatccagggcgacacgcagggccgcatgaacgaggtggaaggcagcagcgtc
ttcgccttccagctgccctcgctgccgggctcgaccggcgggctgccggtgcagatggtg
atccgcagcgcgggcgaccaccgcaccgtgttcgaggccatggaggcactgaagaagtcg
gcgcgcgacagcggcaagttcatcgtggtcgacagcgacctggagttcaacaaccccacg
gtcgagatccgcgtggaccgcgccaaggccaacagcatgggcgtgacgatgaagtccatc
ggcgacacgctggcggtgctggtgggcgagaactacgtcaaccgcttcggcatggacggc
cgctcgtacgacgtgatcccgcagtcgccgcgcgagcagcggctgacggccgaggcgctc
tcgcgctacttcgtgaagagcgcgagcggccagccggtgccgctggccaacctggtgcag
ctgtcgaccagcgtggggcccaacaagctcacgcagttcaaccagctcaacgcggccacc
ttccaggccattccggcgccgggcgtgaccatgggcgacgcggtggccttcctgagcgag
gaggcgaagaagctgccggccggcttcagctacgactggcaatcggatgcgcggcagttc
acgcaggaaggctcggcgctggtgatggccttcgtgttcgccatcgtcgtcatctacctg
gtgctggcggcgcagtacgagagcctgcgcgacccgctgatcatcctgatcagcgtgccg
atgtcgatctgcggcgcgctggtgccgctggcactgggcttcggcaccatcaacatctac
acgcagatcgggctggtgacgctgatcgggctcatcagcaagcacggcatcctgatggtg
gagttcgccaacgagatccagatgaacaagggcctcgaccggcgctcgtccatcgaggaa
gccgcgcgcatccggctgcgccccatcctgatgaccacggccgcgatggtggtgggcctg
gtgccgctgctgttcgcgagcggcgcgggtgccaacagccgtttcagcatcggcctggtg
atcgtggtcggcatgctggtgggaacgctgttcacgctgtttgtgctgcccaccatgtac
acgctgctggcgcgcgaccaccgcgcggagggccgctcgcagcgcgcggccgagctcgag
gcgctgtccgaaggagcatga
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