Variovorax sp. PAMC28562: H7F36_01030
Help
Entry
H7F36_01030 CDS
T10649
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F36_01030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_01030
Transporters [BR:
vax02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
H7F36_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
Rad17
SMC_N
CysA_C_terminal
AAA_22
AAA_25
AAA
ABC_ATPase
nSTAND3
PhoH
AAA_16
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QNK73892
LinkDB
All DBs
Position
complement(219866..220948)
Genome browser
AA seq
360 aa
AA seq
DB search
MSFLQLTGVTKFYGDTCAVSSMNLSVEKGEFVSLLGPSGCGKTTTLQMVAGFEAVTQGRI
ELDGRDITHAKANTRGLGIVFQTYALFPHMTVRDNVSFGLEMRKLPKSERRERVRDALGL
VHLEAHADKYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQ
RKVGTTTVMVTHDQSEAMSISDRVVVMEGGRATQIDHPHNVYEHPRTRFISTFVGKANLL
EGRISGDSPRQTVRIGALSVDVADTGFRAGASVLLSVRPEKLQLVASGSGRLDGEVGERF
FLGSQWLYRVATPIGDLMVLCPNDGRDALEEGARAAVDWPDHCTRLLPADDETVVAEVAA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcctgcaactcacgggcgtcaccaagttctacggcgatacctgcgccgtgtct
tcgatgaacctgtcggtcgagaagggcgagttcgtctcgctgctcgggccgtccggttgc
ggcaagaccaccacgctccagatggtcgccggcttcgaggcggtgacacaaggccgcatc
gaactcgacggccgcgacatcacccatgccaaggccaacacgcgcggcctcggcatcgtg
tttcagacttacgcgctcttcccgcacatgacggtgcgcgacaacgtcagcttcgggctg
gagatgcgcaaattgccgaagtccgaaaggcgcgagcgggtgcgcgatgcgctgggcctg
gtgcacctcgaagcgcacgccgacaagtacccgcgcgagttgtccggcggacaacggcag
cgcgtggcgctggcgcgtgccctggtgatcgagccgcctgtcctgctgctcgatgagccg
ctgtcgaacctcgacgccaagctgcgtgaggaaatgcagttcgaactgcgccagatccag
cgcaaggtcggcaccaccaccgtcatggtcacgcacgaccaaagcgaagcgatgtcgatc
agcgatcgcgtcgtcgtcatggaaggcggccgcgccacgcagatcgaccatccgcacaac
gtctacgagcatccgcgcacgcgcttcatctcgaccttcgtcggcaaggccaacctgctc
gaaggccgaatcagcggcgacagcccgaggcaaaccgtgcggatcggcgcattgagcgtc
gatgtggccgacaccgggttccgcgccggggcgtccgttctgctcagcgtgcgtccggaa
aagctgcaactggtggcgtcgggcagcggccgtctcgatggcgaagtcggcgagcgcttc
tttctcggcagccaatggctctatcgcgtcgccacgcccatcggtgacctgatggtgctg
tgcccgaacgatggccgcgacgcattggaagagggcgcgcgcgccgctgtcgactggccg
gaccattgcacgcggttgctgccggccgatgacgaaacggtggtcgccgaggtcgcagcg
tga
DBGET
integrated database retrieval system
