Variovorax sp. PAMC28562: H7F36_02465
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Entry
H7F36_02465 CDS
T10649
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_02465
Enzymes [BR:
vax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
H7F36_02465
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
H7F36_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QNK74140
UniProt:
A0A7G8W197
LinkDB
All DBs
Position
499049..500620
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AA seq
523 aa
AA seq
DB search
MAKTTRRQASLTGNIRHLVIILGDQLDQESSALEGFDPLQDLVWMAEVAEESTHVWSAKQ
RIAVFLSAMRHFADHLRGQGLPMHYTRLDDADNLGTLALEIDRAIKQVKPAGLVLTAPGD
WRVLQSIRAIAAQHQLPLELRDDTHFFSTVRDFAAHAKDRKQLRLEYWYRELRHKNGILM
EGSKPVGGQWNFDADNRESFGKAGPQNVPPPTRFEPDVTTQEVIALVNTRFASHPGTLVS
FGWPVTRIQALQALQTFIAERLPLFGQYEDAIWAGEAWLYHSHLSSALNLKLLNAREVVQ
AAEDAWRAGHAPLAAVEGFVRQILGWREFVRGVYWTQMPDYIDRNALNAQGDLPAWYWTG
ETEMACLKDAIGQTLEHGYAHHIQRLMVTGLYALLLGVKPQAVHAWYLSVYVDAVEWVEL
PNTLGMSQFADGGLMASKPYVATGKYIQRMSNHCKGCKYDPAQSTGDNACPYTTLYWDFL
IRHEVLLKKNPRMAMQLKNLARLDLPARVAIESQATAHRNAQL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaccacacggcgccaagcgtccctgactggcaacatccgccatctcgtcatc
attttaggtgaccaattggatcaagaatcttctgccttggaaggcttcgatccattgcaa
gaccttgtctggatggctgaggtagcagaagagtcgacccatgtctggtctgccaaacag
cgcattgcggtgtttttgagcgcgatgcgccacttcgccgatcacctgcgcgggcaagga
ctgcccatgcactacacccgcctcgacgacgctgacaatctgggcacactggcactcgaa
atcgatcgggcgatcaaacaagtcaagcccgctggactggtcctgactgcaccgggtgac
tggcgggtgctgcaaagcattcgcgccattgccgcccaacaccagttgccgctggagttg
cgtgacgacacgcattttttcagcactgtacgggactttgccgctcacgcaaaagatcga
aagcaactgcgactcgagtactggtaccgcgaactgcgacacaagaacggcatcttgatg
gagggctcgaaaccagtgggtggtcagtggaacttcgatgcggacaatcgtgagtccttc
ggaaaggcggggccgcaaaacgtcccaccacccacacgcttcgagccggacgtcaccacg
caggaagtgatcgctttggtcaacacccggttcgcaagccacccgggtacgctcgtaagt
tttggctggccagtcacgcggatccaagcgctgcaggcactgcagacgtttattgcggag
cggcttccgctattcggccaatacgaagacgccatctgggccggcgaggcctggctttat
cactcccacctcagcagcgcactcaacctcaagcttttgaacgcgcgcgaggtggtgcaa
gcggccgaagatgcctggcgtgcaggtcacgcaccgctggccgcggtggaggggttcgtt
cggcaaattctgggttggcgtgagtttgtgcgtggtgtttactggacgcagatgcccgac
tacatcgatcgcaacgcactgaatgcccaaggcgacttaccagcctggtactggaccggc
gaaaccgagatggcgtgcctgaaagacgccataggtcagacgttggaacacggttacgcg
caccacattcagcgcctgatggtgacgggcctgtatgccctgcttcttggagtcaagcca
caggcggtacatgcttggtacctgagcgtgtatgtcgatgcagtggaatgggtcgagtta
ccgaacacgctgggtatgagccagttcgctgatggtgggttgatggccagcaagccctat
gtggctaccggcaaatacattcagcgaatgagtaaccactgcaaggggtgcaagtacgac
cccgcgcagtcgactggcgataacgcttgcccgtacaccacgctgtactgggattttcta
attcgccacgaggttttgctgaagaaaaacccgcgtatggcgatgcagctcaagaatctc
gcacggctggacctacctgctcgcgtagccatcgaaagccaagctacagcacatcgcaat
gcccagctttga
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