Variovorax sp. PAMC28562: H7F36_02935
Help
Entry
H7F36_02935 CDS
T10649
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vax03009
]
H7F36_02935 (rsmB)
Enzymes [BR:
vax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
H7F36_02935 (rsmB)
Ribosome biogenesis [BR:
vax03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H7F36_02935 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QNK74217
LinkDB
All DBs
Position
complement(595245..596609)
Genome browser
AA seq
454 aa
AA seq
DB search
MPDLTDPSSGTAPNQPPLWRQLQLTAMALAAIRSGVSGSVAFENVETAMRPGVQALGFQV
LRWLGRAEALRRHLAKRTPPPAADALLCTALALAWDVGRAPYEPFTLVDQAVEAAKRNPA
TRAQASFINACLRRFLRERDELVEVTEREPVAQWNHPRWWIERLRRDHPRDWQRVLTADN
LQAPLTLRVNLRKTSVADYLVALTADSQTAKAVGASGVQLGRARPVLQLPGFAEGEVSVQ
DAAAQLAAPLLLEGFDLASGARLRVLDACAAPGGKTAHLLELDRGRGLDVTALEIDSTRT
GRIQETLTRLGLQAHIVVADAARPENWWDGTPFDAILLDAPCTASGIVRRHPDVRWLRRE
SDIEQLAAQQAQLLAALWPLLRAGGRLVYCTCSVFREEGSQQIDAFLAHNTDARLRPSPG
HLLPQSAGIAHAVPDNALGEHDGFFYALLEKRTG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgatctcacagacccctccagcggcactgcgccgaaccagccgccgctttggcgc
caattgcagctgacagcgatggccctggccgccatccggagcggcgtgtccggctctgtc
gccttcgaaaatgtggagaccgccatgcggcccggcgtgcaggcgctcggcttccaggtg
ctgcgatggctcggccgcgccgaggcgctgcgtcggcacctcgccaaacgcacgccacca
ccggccgccgacgcgctgctttgcaccgcattggctttggcgtgggacgttggccgtgcg
ccgtacgagccctttactttggtcgatcaagccgtcgaggccgccaagcgcaaccccgcc
acgcgtgcccaagcgagcttcatcaacgcctgcttgcggcgctttctgcgagagcgcgac
gagctggtcgaggtgacggaacgcgagccggtcgcgcagtggaaccatccgcgctggtgg
atcgagcggctgcggcgcgaccatccgcgcgattggcagcgggtgctcacggccgacaac
ctgcaagcgccgctgacgttgcgcgtcaatctccgaaagacgtcggttgccgactacctg
gtcgccctgaccgccgacagtcagaccgccaaggccgtgggcgcgagcggcgtgcaattg
ggccgtgcacgacctgtgctgcaactgcccggctttgccgaaggcgaggtgtcggtgcag
gacgccgccgcgcagctcgccgcgccgctgctgctcgaaggcttcgatctggcgtccggg
gcgcgtctgcgagtgctcgacgcctgcgccgcgcccggcggcaagactgcgcacctgctg
gagctcgaccgtggacgcggcctcgatgtcaccgcgctcgaaatcgactccacgcgcact
ggccgtatccaggagacgctgacgcggctcggattgcaggcgcatatcgtcgtggccgac
gctgcgcgaccggaaaattggtgggacggtacgccattcgatgccatcctgctcgacgcg
ccgtgcacggcgtcgggcatcgtgcgtcgccatccggacgtccgatggctgcgccgggag
agtgacatcgagcagctggcggcccagcaagcccagctgctggccgcactctggccgctg
ttgcgggctggaggacgtcttgtctactgcacctgttcggtttttcgtgaagagggatcg
caacagatcgatgcgtttcttgcgcacaacaccgacgcccgattgcgaccttcgcccggc
catttgcttccccaaagcgccgggattgcccatgccgtcccggacaatgccttgggtgaa
cacgacggtttcttctacgccctgctcgaaaagcgcaccggctga
DBGET
integrated database retrieval system
