KEGG   Variovorax sp. PAMC28562: H7F36_03140
Entry
H7F36_03140       CDS       T10649                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
vax  Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:vax00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vax02044]
    H7F36_03140 (tssF)
Secretion system [BR:vax02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F36_03140 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QNK74252
UniProt: A0A7G8W1K9
LinkDB
Position
complement(640939..642870)
AA seq 643 aa
MDPRLLNLYEQELRYFRESSGEFARAFPKIAHRLGVEGQEVADPYVERLIEATAFLSARV
GLKLDAEFPRFTGHLLDIVYPHFMAPTPSMTVVCCTPELDDANLATGPTLPRNSGLRSRH
AVGQNTHCEFRTARALRVWPIEVIRAQYFTYAPDLPINQHPQAREIRGGLRMSLRTTAGL
TLDKLQLDELVIHFGGADDVAWQLHECFLGKPIGVMVQPIGPGGTVGAAGPGAVRTLPAS
AVQPIGFDDDEALLPVTATGFSGFRLVQEYFAFPQRFQFARIVGLQALLRGMPGTEVELV
VLFSRGDPALEKLVTADNIQLHCVPAINLFPKRLDRVAITESNSEFHLVPDRTRPQDFEV
HSVTEVLGLGNVGQGQGAPGSGQSDGPQELLFRPFYAAFHGSRHSHPAYYTTTREPRSLS
VKQRTEGHRSSHIGSEVYMQIVDPQEAPYPPGLRQLAVAALVTNRDLPMLLPLGRDNDFD
CVDSFPVQRVRMVRGPSRPVSPVVNNGLGWRVVDHLALNYLSIGGADTHKNAAALREMLM
LYAVHADESRQVQVRGLLSVSSKPVARRLPMAGPIAFGRGLEVTLEVDRNAFHGQSAFLF
GAVLAQYLARHVEVNHFVETVLAVAGKGETMRWRPLCGTRPVM
NT seq 1932 nt   +upstreamnt  +downstreamnt
atggacccccgcctgctgaacctgtacgagcaggagcttcggtattttcgcgaaagctcc
ggcgagttcgcacgggcgtttcccaagatcgcacaccggctcggtgtcgaaggtcaggag
gtcgccgacccgtacgtcgagcgcctgatagaggccaccgccttcttgtcggcgcgcgtc
ggactcaagctcgatgcggagtttccgcgcttcaccgggcacctgctcgacatcgtgtat
ccacacttcatggcgccgacgccgtccatgacggtggtgtgctgcactcccgaactcgac
gatgcgaaccttgccaccgggcccacgctgccgcgcaacagcggcctgcgttcgcgccat
gccgtggggcagaacacgcactgcgaatttcgcaccgcacgtgccttgcgcgtgtggccg
atcgaagtgatccgggcgcagtacttcacctatgcgcccgacctgccgatcaaccagcat
ccgcaggcgcgcgaaatccgcggcggcttgcgcatgtcgttgcgcacgacggccggcctc
accctcgacaagctccagctcgatgagctggtgatccacttcggtggcgccgacgacgtg
gcgtggcaattgcacgaatgctttctcggcaagccgatcggtgtcatggtgcagccgatc
ggccctggcggtacggtcggcgcagcggggccaggcgcggtgcgaacactgcctgcaagt
gcggttcagccgataggcttcgacgacgacgaagcgctgctgccggtaacggccaccggc
ttctccggcttcaggctggtgcaggagtacttcgcgtttccgcagcgctttcagttcgcg
cgcatcgtcggcttgcaggcgttgctgcgcggcatgccgggcaccgaggtcgagctggtc
gtgctgttctcgcgtggcgacccggcgctcgaaaaactggtgacggcagacaacatccag
ctgcactgcgtgccggccatcaacctctttcccaagcgcctcgaccgtgtcgccatcacc
gagagcaacagcgaattccatctggtccccgaccgcacgcggccccaggatttcgaggtg
cattcggtcaccgaggtgctcgggctcggcaacgtcggtcagggccagggagccccaggg
tcgggccagtccgatggtccgcaggagctgctcttccgccccttctatgccgcgttccat
ggcagccggcacagccatcccgcgtactacacgaccacgcgtgagccgcgcagtctgtcg
gtcaagcagcgcaccgaggggcatcgcagcagccacatcggctccgaggtctacatgcag
atcgtcgacccgcaggaggcgccgtacccgccgggcttgcgccagttggcggttgcggcg
ctcgtgaccaatcgcgatctgccgatgctgctgccgctcgggcgcgacaacgatttcgat
tgcgtcgactcgttcccggtgcagcgcgtacgcatggtgcgcggcccgtcgcggccggtg
tcgccagtggtgaacaacggccttggctggcgtgtggtcgaccatctggcgctcaactac
ctgtcgatcggcggtgccgatacgcacaagaacgcggctgccctgcgcgagatgctgatg
ctctatgcggtgcatgccgacgagtcgcgccaggtgcaggtgcgcggcttgctgtcggtg
tcgtcgaagccggtggcgcgacgcttgccgatggccggcccgatcgctttcggccgcggg
ctcgaagtcacgctcgaagtcgaccgcaatgcttttcatgggcagagcgccttccttttc
ggcgccgtgctggcgcagtatctggcgcgccatgtcgaggtgaatcactttgtcgaaacg
gtgctcgccgtcgccggcaagggcgagacgatgcgctggaggccgctgtgcgggacgcgc
ccggtgatgtga

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