Variovorax sp. PAMC28562: H7F36_03285
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Entry
H7F36_03285 CDS
T10649
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
vax Variovorax sp. PAMC28562
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
MBG_2
DUF5649
Motif
Other DBs
NCBI-ProteinID:
QNK74278
LinkDB
All DBs
Position
complement(672173..677488)
Genome browser
AA seq
1771 aa
AA seq
DB search
MSQVASPLRRRTPPGERAARHTAFVLRPLAYALVCAGAVSAQAQVPTGFGLVRGAVNTPA
TAVNGNGGQTMNITQTSARAVVNWTGFSIGAQDRVQIEQTLGNTSVMLNRVTGGAESQIM
GSLSANGHVYLINPNGITFGKGSSVSVGGLVASTLNLVDDAQFSGFMSGTSKQLAFELPV
GKASTVLNQGSITAADGGVVALIGAQARNEGSINVARGSIGLAAGQRVTLDFDGDGLTSF
HVDPTVLAASARAENAASGVLSANGGRVVMVGASSAAETVVNQAGIVRAQSISNRAGEII
LGSSGGAVGNAIVISGGQLDVSGVEAGVPGGRIDVRAPLLRIAAGTLSAGGATAGGSITT
QAAIVEVGRGVVIDAHGGSGANGSWTLDSGRTLVVTKADPIPDASVAIQPFGTSKLADST
LGATMGRATDVVLTSHAQPQQVGNFGGGVQFDNGSQVIKTEGRASQLTVNSDRSVFMDAN
SALRSTAGALNIDFNADASGVLLPATPAVTDRNDNNQRVGNISISGTRIETAGGNLRLYG
QSDAVNGRALGATSSSGGGVVNGVTISDSAISTCAQAGGACGGSGSILVRGQGATAGGTG
QTVVAGPGVRVDGGSFETGSGTISMDGRGGLAQTGVTITGLFGEAFTTPSSLRSASGDIT
LVGSTRSWTAGETSGTLQNVNGGSGIELAQAGIATGGNVRLDGSGADLTGLMNQAAFQAA
AAAANNGAGSTFGASNGVTMADSSIVAGAGKSLDLLGTAGSRGFTVTGNKAPVLTLDAND
AFGVVVRANASNGLQAEGGRITINGRGSDVALAQFGADAGPTFGIQPPGESILGAQPRTL
LSTRSQTMAGGNIAISGRNVVIAGSGTAAVIDSGGAGQSGNIAVTGTAVAGVNASGIVVI
GDTVELNASATSAVGNAGRIDVVGDKSLYANGRLSARGGSAGGNGGRIETSAPALQLQGI
RVDGSAPAGQAGSWVIDPVDVTIAHGAAAGTLPTNPFVPLVASTVQDGDINFALDNNTGV
TITTGTPAPTTIGNVTFGLNTVIQRTSAGAPVKFEIDANAGISAFNPTVIQSTGGSLDVV
LSAGLGGVGGNVNYSGQITTNGGSVSMTGTSLFATCGVCLTNAKVDTRVGQSDANAGGAV
QLIGTRNPGTYFFLAPAVVGLTGSTIQSATGDVTLSGISNATGTGVQLISNFNGTNSSIS
TTSGAIRITGVGNSLSGSGAPTAGHGVEINGATVQSVSGNISVHGLRAVQTPDSPVGNGV
RIVNGGSVTTLGAGNIEITGESQIADAGIFIQGPTGTGIPIPASRVAGGGNVVLRAASGG
TADALAVGGAVNAGGVLDLRPGGVDAGGNAGDRIANPITLGGTAANGFAVSADELTRITA
GSIVVGSNTQAGNIDVVGSLAMVSPLTLQNGGGGNITLGASVSAPQLGLLSAGNITQSAG
AGIAAGTLLARSSGGNVLLSSAANDVGVVAGGAAGRFDYTDVNAVTLGNASVIGFDAASN
TPQVVTAGSMAADTVFVRTLGGDLSLNTNVTSGSGADLVAASRFQNLAADTIAGAPWRVW
AQTWIGETRNGLSGSGPLPNLYHCAYLGLCSVSVTPGDNHFIYAQQPTATVVVGNATRPG
GLPNPPFIYSLTGLILGDTGSSFGGALSSPANASSPPGAYPINGAFASTAGYAVNVVPGQ
LNVGAVPASPLFVLPQLSQLPKPDVLREMPDSWIYDRNIGAPPICFATGPLDGERAQQGG
DVLASEWSRVRSRPNLTSCVDAERRNGCSDF
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagttgcatccccactacgtcgccgcacccccccgggtgagcgggccgcacgc
cataccgccttcgttttgcggccgctcgcctatgcgctggtctgtgccggtgcggtgtcg
gcgcaggctcaggtgccgaccggattcggtcttgttcgcggtgccgtcaacacgccggct
acggcggtcaatggcaatggagggcagacgatgaacatcacgcagacctctgcgcgggcc
gtcgtcaactggaccggcttttccattggcgcgcaggatcgcgtgcagatcgaacagacg
ctgggcaacaccagcgtgatgctcaatcgcgtgacagggggcgccgagtcgcaaatcatg
ggctcgctgtccgccaacgggcacgtctatctcatcaatccgaacggcatcaccttcggc
aaggggtcgtcggtgagcgtcggcggcctggtggcttcgacgctgaacctcgtggacgac
gcgcagttcagcggtttcatgtcgggcacgtccaaacaactggcgttcgagcttccggtg
ggcaaggccagcactgtactcaatcaggggagcatcacggcggccgatggcggcgtcgtg
gcgctgatcggcgcccaggcgcgcaacgaaggttcgatcaatgtggcgcgcgggtccatc
gggctggcggccgggcagcgggtcacgctcgacttcgacggcgacggcctcaccagcttt
catgtcgacccgaccgtgttggccgccagcgccagggccgagaacgcggccagtggcgtg
ctgtcggccaacggtggtcgcgtggtcatggtcggtgcgtcgagcgccgcggagacggtc
gtcaatcaggcgggcatcgtgcgcgcgcaatccatcagcaaccgggctggcgagatcatt
cttggaagcagtggcggcgcggtcggcaatgccatcgtgatatcgggtggtcaactcgac
gtgagcggtgtcgaggccggagtgccgggcggccgcatcgacgtgcgcgcgcctttgctg
cgcattgccgccggcacgttgagtgcgggcggcgccaccgccggcggcagcatcacgacc
caagccgctatcgtcgaagtcggccgcggcgtcgtgatcgatgcgcacggtggcagcggc
gccaacggcagctggacgctcgactcgggtcgcacgctggtcgtcaccaaggccgacccg
atccccgacgcctcggttgccatccagcctttcggcacgtcgaagctcgccgattcgacg
ctgggggccacgatgggtcgcgccaccgatgtggtgctgacctcgcacgcgcagccgcag
caggtcggcaactttggcggcggcgtgcagttcgacaacggctcgcaagtcatcaagacc
gaaggccgtgcatcgcagctgaccgtcaattcggatcgaagcgttttcatggacgcgaat
tcggcgctgcgctcgaccgccggcgcgctcaacatcgatttcaatgccgacgccagcggc
gtgctgttgcccgccacgccagccgtgaccgaccgcaacgacaacaaccagcgggtcggc
aatatctccatctccggcacccgcatcgaaaccgcgggcggcaacctgcggctctacggg
cagagcgatgcggtcaacggacgcgcactgggcgccacttcgagcagcggcggcggcgtg
gtcaacggcgtcaccatttccgacagcgccatctcgacgtgcgcgcaggcgggcggcgcg
tgcggtggcagcggcagcatcctggtgcgcgggcaaggcgcgaccgcgggtggtacgggc
cagaccgtggtggcggggccgggcgtgcgcgtcgatggcggcagcttcgagaccggcagc
ggcaccatttcaatggacggccgcggcgggctggcgcaaaccggcgtgacgatcaccggc
ctcttcggcgaagccttcacgacaccctcgtcgttgcgatctgccagtggcgacatcacg
ctggtcggcagcacccgaagctggacggccggcgaaaccagcggcacgctgcaaaacgtc
aacggcggctcgggtatcgaactggcgcaggccggcatcgcgaccggcggcaacgttcgg
ctcgacggcagcggtgccgacctcaccggcctgatgaaccaggcggcctttcaggcggct
gcggccgcagccaacaacggcgcggggagcacgttcggtgcatcgaacggcgtcacgatg
gccgattcgagcatcgtcgcaggggcaggcaagtcgctcgacctgctcgggactgcgggc
agccgcggcttcacggtcaccggcaacaaggcgccggtgctcacgctcgatgccaacgac
gccttcggtgtggtggttcgcgccaacgcgtccaacggccttcaggccgaaggcgggcgc
atcacgatcaacggtcgcggcagcgatgtggcgttggcgcaattcggtgccgatgcagga
ccgaccttcggcatccagccgcccggcgaatcgattctgggcgcgcagccacgcaccctc
ctgtcgacgcgcagccagaccatggcgggcggcaacatcgcgatcagcggacgcaacgtg
gtgatcgccggcagcggcaccgcggcggtcatcgacagtggcggcgccgggcaatcggga
aacatcgctgtcaccggcactgccgtcgccggcgtcaacgccagcggcatcgtggtgatc
ggcgacacggtcgagctgaacgcaagcgcgacgtcggccgtcggcaatgccggtcgcatc
gacgtggtcggcgacaagtcgctctatgcgaacggccgcctttcggcgcggggcggttcg
gcaggcggcaatggtggccgcatcgaaacctcggcgcccgcgttgcaactgcaagggatt
cgtgtggacggatcggcgccggctggccaggccggaagttgggtgatcgacccggtggat
gtcaccatcgcccacggcgctgccgcaggcacgctgccgaccaatccatttgtgccgctc
gttgcatcgaccgtgcaggacggcgacatcaacttcgcgctcgacaacaacaccggcgtg
accatcaccaccggcacgccggcgccgaccacgatcggcaacgtcaccttcggcctcaat
accgtcatccagcgcaccagcgcaggtgcgccggtgaagttcgagatcgatgccaacgcg
ggcatctcggccttcaacccgacggtgatccagtcgaccggcggttcgctggacgtggtg
ctcagtgccggcctgggcggcgtcggcggcaacgtcaactacagcggacagatcaccacc
aacggcggcagcgtgtcgatgaccggtaccagcctgttcgctacttgcggcgtgtgcctg
accaacgcgaaggtcgacacccgtgtcgggcaaagcgatgccaatgcaggcggcgcggtg
caactgatcggcacacgcaacccggggacttacttcttcctggcgccggcggtcgtcggt
ctcacgggctcgacgatccagagcgcaaccggtgacgtcacgctgtcgggcatcagcaat
gccactggcaccggcgtgcaactgatctccaacttcaacgggacgaacagcagcatttcc
accaccagcggcgccatccggatcacgggcgtcgggaactccttgtcgggcagcggtgcg
cccacggcagggcacggcgtcgagatcaacggcgccaccgtccaaagcgtcagcggcaac
atcagcgtgcacggcctgcgtgcggtgcagacgcccgactcgcctgtcggcaacggtgtt
cgcatcgtcaatggcggtagcgtcaccacgctgggcgcgggcaacatcgaaatcaccggc
gagtcgcagatcgcggatgccggcatctttattcaagggcccaccggcacaggcattccc
attcctgcatctcgcgtggcgggcggcggcaacgtggtgcttcgcgccgcgagcggcggt
acggccgatgcactggccgtcggcggcgccgtcaacgccggcggcgtgctcgacctccga
cccggtggcgtcgatgccggaggcaatgccggtgaccgcatcgccaacccgatcacgctg
ggcgggacggcggccaacggcttcgcggtcagcgccgacgaactgacgcgcatcacagcc
ggttcgatcgtggtcggcagcaatacgcaggccggcaacatcgacgtggtcgggtcgctg
gccatggtgtcgccgctcacgctgcagaacggtggcggcggcaacatcacgctcggcgca
tcggtcagcgcgccgcagctcggcctcttgagtgccggcaacatcacgcagtcggctggc
gccgggatcgccgcgggcacgctgctggcgcgttcgtccggtggcaatgtgctgctctcg
tccgcggccaacgatgtcggcgtggtggcgggcggcgctgccggacgcttcgactacacc
gacgtcaacgcggtcacgctcggcaacgcgtcggtcatcggcttcgatgcagcgtcgaat
acgccgcaggtggtcaccgcaggttcgatggcggccgatacggtgttcgtgcgcacgctg
ggcggcgacctctcgctcaacaccaatgtgacgagcggcagcggtgccgatctcgtggct
gcttcgcggttccagaacctggcggccgacaccatcgccggtgcaccgtggcgggtgtgg
gcccagacgtggatcggcgagacacgcaacggactgagtggctccgggcctctgcccaat
ctctaccactgcgcgtacctcgggttgtgcagcgtgagtgtgacgccgggcgacaaccat
ttcatctatgcgcagcagccgacggccacggtcgttgtcggcaatgccacccgaccgggc
ggcttgccgaatccgccgttcatctacagcctgaccgggttgatattgggcgataccgga
tcgagttttggcggagcgttgtcgtcgcccgccaacgcgtcgagcccgccaggcgcgtac
ccgatcaacggcgcctttgcgtcgaccgcaggttatgcggtcaacgtggtgccgggccag
ctcaacgtcggtgcagtgcctgcatcgccgttattcgttctccctcaactgtctcagttg
cccaagcccgatgtgctgcgcgagatgcccgacagctggatctacgaccgcaatatcggc
gcgccgccgatctgctttgccaccgggccgctggatggcgagcgcgcacagcaaggcggc
gacgtgctcgccagcgaatggtctcgcgtgcgctcccggcccaacctcacgagttgcgtc
gacgccgagcggcgcaacggctgttcggacttctag
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