KEGG   Variovorax sp. PAMC28562: H7F36_03355
Entry
H7F36_03355       CDS       T10649                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
vax  Variovorax sp. PAMC28562
Pathway
vax03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:vax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H7F36_03355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vax03400]
    H7F36_03355
DNA repair and recombination proteins [BR:vax03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H7F36_03355
SSDB
Motif
Pfam: Ku NAD_binding_2
Other DBs
NCBI-ProteinID: QNK74292
LinkDB
Position
complement(693892..694842)
AA seq 316 aa
MPDSKPAPRVLWKGAISFGLVHIPVALYSATTDSGIDFDWLDKRTMDPVGYKRINKKTGK
EIDREQIVKGIEYEDGQYVVLSDAEISAAYPKTTQTIEIETFVPAAGIPFVYLERPYYVA
PINRGAKVYALLRETLQRSGRIGVARVVIQTKEHLAALVPSGAGLVLNLLRWGTDIRSWK
DLPLPAEGAKQAGLSDSELKMAKALVEDMSSDWDPDAFKNSFKDAIMKLVDRKVEAGQTE
AVEKLEPMEAADAESSAKIIDLTELLQRSLRKGGARAAPDAPVSGGAKAATKKSAAVPAA
KKSAPAAAKTSRRRAA
NT seq 951 nt   +upstreamnt  +downstreamnt
atgcccgattcgaaacctgccccgcgcgttctctggaaaggcgccatcagcttcggcctc
gttcacatcccggtcgcgctgtactccgccaccaccgacagcggcatcgacttcgactgg
ctcgacaagcgcacgatggacccggttggctacaagcggatcaacaagaaaaccggcaag
gaaatcgaccgtgagcagatcgtcaagggcattgaatacgaagacggccagtacgtcgtg
ttgagcgatgccgagatttcggccgcctaccccaagaccacgcagaccatcgagatcgag
accttcgtcccggccgccggcattccgttcgtctacctggagcggccgtattacgtggct
cccatcaaccgcggcgccaaggtctatgcgctgttgcgcgaaaccctgcaacgcagcggc
cgcatcggggtggcgcgcgtcgtcatccagaccaaggaacatctggcagcgctggtgccg
tcgggcgccgggctggtgctgaacctgctgcgctggggcaccgacatccgctcctggaaa
gacctgccgctgccggccgaaggcgcgaagcaggcgggcctttcagacagtgaactcaag
atggcgaaggcactggtcgaagacatgagttccgactgggacccggacgctttcaagaat
tcgttcaaggacgcgatcatgaagctggtcgatcgcaaggtcgaagccggacagaccgaa
gcggtcgaaaagctggagccgatggaggcagcggatgcggaaagcagcgccaaaatcatc
gacctgaccgaattgctgcagcgcagcctgcgcaagggcggcgcccgggcggccccggat
gcgcccgtgtccggcggggccaaggcagcgaccaaaaagtcggctgccgtgccggctgca
aaaaagtccgcgccggcagcggcaaagacatctcggcgccgcgccgcctga

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