Variovorax sp. PAMC28562: H7F36_03355
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Entry
H7F36_03355 CDS
T10649
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
vax Variovorax sp. PAMC28562
Pathway
vax03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H7F36_03355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_03355
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H7F36_03355
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Ku
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QNK74292
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All DBs
Position
complement(693892..694842)
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AA seq
316 aa
AA seq
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MPDSKPAPRVLWKGAISFGLVHIPVALYSATTDSGIDFDWLDKRTMDPVGYKRINKKTGK
EIDREQIVKGIEYEDGQYVVLSDAEISAAYPKTTQTIEIETFVPAAGIPFVYLERPYYVA
PINRGAKVYALLRETLQRSGRIGVARVVIQTKEHLAALVPSGAGLVLNLLRWGTDIRSWK
DLPLPAEGAKQAGLSDSELKMAKALVEDMSSDWDPDAFKNSFKDAIMKLVDRKVEAGQTE
AVEKLEPMEAADAESSAKIIDLTELLQRSLRKGGARAAPDAPVSGGAKAATKKSAAVPAA
KKSAPAAAKTSRRRAA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattcgaaacctgccccgcgcgttctctggaaaggcgccatcagcttcggcctc
gttcacatcccggtcgcgctgtactccgccaccaccgacagcggcatcgacttcgactgg
ctcgacaagcgcacgatggacccggttggctacaagcggatcaacaagaaaaccggcaag
gaaatcgaccgtgagcagatcgtcaagggcattgaatacgaagacggccagtacgtcgtg
ttgagcgatgccgagatttcggccgcctaccccaagaccacgcagaccatcgagatcgag
accttcgtcccggccgccggcattccgttcgtctacctggagcggccgtattacgtggct
cccatcaaccgcggcgccaaggtctatgcgctgttgcgcgaaaccctgcaacgcagcggc
cgcatcggggtggcgcgcgtcgtcatccagaccaaggaacatctggcagcgctggtgccg
tcgggcgccgggctggtgctgaacctgctgcgctggggcaccgacatccgctcctggaaa
gacctgccgctgccggccgaaggcgcgaagcaggcgggcctttcagacagtgaactcaag
atggcgaaggcactggtcgaagacatgagttccgactgggacccggacgctttcaagaat
tcgttcaaggacgcgatcatgaagctggtcgatcgcaaggtcgaagccggacagaccgaa
gcggtcgaaaagctggagccgatggaggcagcggatgcggaaagcagcgccaaaatcatc
gacctgaccgaattgctgcagcgcagcctgcgcaagggcggcgcccgggcggccccggat
gcgcccgtgtccggcggggccaaggcagcgaccaaaaagtcggctgccgtgccggctgca
aaaaagtccgcgccggcagcggcaaagacatctcggcgccgcgccgcctga
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