Variovorax sp. PAMC28562: H7F36_03995
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Entry
H7F36_03995 CDS
T10649
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax00061
Fatty acid biosynthesis
vax00071
Fatty acid degradation
vax01100
Metabolic pathways
vax01212
Fatty acid metabolism
vax02024
Quorum sensing
vax04146
Peroxisome
Module
vax_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H7F36_03995
00071 Fatty acid degradation
H7F36_03995
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H7F36_03995
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F36_03995
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vax01004
]
H7F36_03995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vax04147
]
H7F36_03995
Enzymes [BR:
vax01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H7F36_03995
Lipid biosynthesis proteins [BR:
vax01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
H7F36_03995
Exosome [BR:
vax04147
]
Exosomal proteins
Exosomal proteins of breast milk
H7F36_03995
Exosomal proteins of breast cancer cells
H7F36_03995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QNK74411
UniProt:
A0A7G8W218
LinkDB
All DBs
Position
complement(828694..830388)
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AA seq
564 aa
AA seq
DB search
MTDRPWLSSYPQGVPADIDASRYASLVTLMEESFTKYADRTAYSFMGKDVSYAETDKQSK
ALAAYLQGLGLVKGDRVAAMMPNCPQYPMAVAAILRAGLILVNVNPLYTPRELEHQLKDS
GAKAIVIMENFGVTLQHCIASTPIKHIVLASMGDRLGFLKGALVNYVVRNVKKLVPDFNL
PTAVRFNDALDQGAARTFQPVTIGPDDVAVLQYTGGTTGVSKGAVLLHRNVIANVLQSEA
WNDPVMHRVPNGEQPTSVCALPLYHIFAFTVNMMLGLRTGGKVILIPNPRDMAATLKELS
KHTFHSFPAVNTLFNGLANHADFNTVNWKNLKVSVGGGMAVQGAVAKLWLEKTGCPICEG
YGLSETSPSATCNPTTSTSYTGTIGLPLPSTWLKLLDDDGIEVPAGERGEIAIKGPQVMA
GYWQRPDETAKVMTPDGYLKTGDIGTVDAQGFFKIVDRKKDMVLVSGFNVYPNEVEDVVA
TLAGVLECAVVGVPDEKTGEAVKLVIVRKDPTLTEDQVKEFCRANLTGYKQPRVIEFRTD
LPKTPVGKILRRELRDAKKPAAAV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccgcccctggctgagcagctacccgcaaggcgtacccgccgacatcgacgcc
tcgcgctacgcgtcgctcgtcacgctcatggaagaaagcttcaccaagtacgccgatcgc
acggcctacagcttcatgggcaaggacgtcagctacgccgagaccgacaagcaaagcaag
gcgttggcggcgtacctgcaaggtctcggcctggtcaagggcgaccgcgtcgccgcgatg
atgcccaactgcccgcagtacccgatggccgtcgccgccatcctgcgggcggggctgatt
ctggtgaatgtgaatccgctctacacgccgcgcgagctcgagcaccaattgaaggactcc
ggtgccaaggcgatcgtgatcatggagaacttcggcgtcacgctgcagcactgcatcgcg
tcaacgccgatcaagcacatcgtgctcgcgtcgatgggcgaccggctcggctttttgaag
ggtgcgctcgtcaactatgtggtgcgcaacgtcaagaagctcgtgcccgacttcaatctg
ccgactgcggtgcgcttcaacgatgcgctcgaccagggcgcggcccggacattccagccc
gtgaccatcgggccggacgatgtcgcggtgcttcagtacaccggcggcaccaccggcgta
tcgaagggcgcggtgctgctgcatcgcaacgtgatcgctaacgtgctccagtcagaagcc
tggaacgaccctgtcatgcatcgcgtgcccaatggcgagcagccgaccagcgtgtgcgcg
ttgccgctctatcacatcttcgcgttcacggtgaacatgatgctgggactgcgcaccggc
ggcaaagtgatcctgatccccaatccgcgcgacatggccgccacgctgaaggagttgtcc
aagcacaccttccacagcttccctgcggtcaacacgctcttcaacggactggccaatcat
gcggacttcaataccgtcaactggaagaatctgaaggtgtcggtcggtggcggcatggcc
gtgcagggcgctgtcgccaagctctggctcgagaaaaccggctgcccgatttgcgaaggt
tacggcctgtcggaaacctcgccgtcggccacttgcaacccgaccaccagcacgtcctac
accggcaccatcgggcttccgctgccgagcacctggctcaagctgctcgacgacgacggc
atcgaagtgccggccggcgagcggggcgaaatcgccatcaagggcccgcaggtgatggcg
ggctactggcagcgacccgatgaaacagccaaggtcatgacgcccgatggctatctcaag
accggcgacatcggcaccgtcgatgcgcagggcttcttcaagatcgtcgaccgcaagaaa
gacatggtgctggtgagcggcttcaacgtctaccctaacgaggtcgaagacgtggtggcc
acgctggccggcgtgctcgaatgcgcggtggtcggcgtgccggacgagaagaccggcgaa
gcggtcaagctggtgatcgttcgcaaagacccgacgctgacggaagaccaggtcaaggag
ttctgccgtgccaacctcaccggctacaaacagccgcgcgtgatcgaattccgtaccgac
ctgccaaaaacgccggtcggcaagatcctgagacgcgaactgcgcgacgccaagaagccg
gctgcggccgtctga
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