Variovorax sp. PAMC28562: H7F36_04070
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Entry
H7F36_04070 CDS
T10649
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F36_04070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_04070
Transporters [BR:
vax02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
H7F36_04070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QNK74424
UniProt:
A0A7G8W231
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All DBs
Position
848088..849665
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AA seq
525 aa
AA seq
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MKLISFVAQRAVLLLAALAASAALAADPTTLVVGMYRPTLSLNQALNPDYTSTVTGSQVF
ASLLRFDAQGKPQPYLAKSWAWSADQRTLTLKLVENGLFHDGKPITSKDVKFSILTVKGL
AGRVSKFNAITEVRTPDAYTVVVQLDRPAPSIVLAMSSPFLPILPEHVYGQGNIRMNPAN
TTGAVGSGPYKLAEFKAGQYVTLERFDKFFLGQPKLERIVFKAGSDLQTLVLGLERGEID
MIPYMYDWRLIKRLSTDKRFTMTSEGYGGIGPLNNLMFNLRHKPLDDVRVRKAIAYAIDR
PFIAKALLGGVTTVAYSPLAPTTPFYTDQVETYPTDLKKAAALLDEAGLKAGADGIRIKL
TMHYPPGNVDYHKNGAEYIRSQLRKVGIDVDVRASDFVSWLKATGSGDFDMTMVSLFNFG
DPAFGVAPQYSSANIQPLPYANNANYRNPIVDDLLDAGSVEIDPQKRQRIYAQFQKIAMD
DVPILPLTVLRYQTVMRKGLVDLPAGFWGTAAPFNDTRWAPDAAN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttcattcgtcgcgcaacgtgcggtcttgttgctcgccgcgctggctgcg
tccgccgccctggctgccgatcccaccacgctggtggtcggcatgtaccgtccgacgctg
tcgctcaaccaggcgctgaaccccgactacaccagcacggtgaccggctcgcaggtgttc
gcgagcctgctgcgcttcgacgcgcaaggcaagccgcagccctacctcgccaagtcgtgg
gcttggtcggccgaccagcgcacgctcacgctcaagctggtcgagaacggtcttttccac
gacggcaagccgatcacttcgaaggatgtgaagttctcgatcctgacggtcaagggcctg
gccggccgcgtctccaagttcaatgcgatcaccgaggtgcgcacgcccgacgcctacaca
gtggtggtgcaactcgaccgtccggcgccctcgatcgtgctggcgatgtcgagcccgttc
ctgccgatcctgccggagcacgtctatggccagggcaacatccgcatgaatccagccaac
accacgggggccgtaggctccggcccctacaagctggccgagttcaaggccggccagtac
gtgacgctggagcgcttcgacaagttcttcctcggccagcccaagctggagcgcatcgtg
ttcaaggccggttccgacctgcagacgctggtgctcggtctggagcggggcgagatcgac
atgattccctacatgtacgactggcgcctcatcaagcgcctgtcgaccgacaagcgcttc
acgatgacatcggagggttacggcggtatcggtccgctcaacaacctgatgttcaacctg
cgccacaagccgctcgacgacgtgcgggtgcgcaaggccatcgcctatgcaatcgatcga
ccctttatcgcgaaggcactgctcggcggcgtcacgacggtggcctacagcccgctggcg
ccgaccacgccgttctatacagatcaggtcgagacctaccccaccgatctcaagaaagca
gccgcgctgctggacgaagccggcctcaaggcgggcgcggacggcatccgcatcaagctc
accatgcactacccgccgggcaatgtggactatcacaagaacggcgccgaatacatccgc
tcgcagctgcgcaaggtgggcatcgacgtcgacgtgcgggcctccgacttcgtcagctgg
ctcaaagccacgggcagcggcgatttcgacatgaccatggtgtcgctgttcaattttggc
gacccggcgttcggcgtcgcgccgcagtactcgtccgccaacatccagccgctcccgtac
gccaacaacgcgaactatcgcaacccgatcgtggacgacctgctcgacgccggctcggtc
gagatcgatccgcagaagcgccagcgcatctatgcgcagtttcagaagatcgcgatggac
gacgtgcccatcctgccgctgacggtgctgcggtaccagaccgtgatgcgaaaaggtttg
gtcgatctgcctgccggtttctggggcacggccgcgccgttcaacgacacacgctgggcg
cccgacgcggccaactga
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