Variovorax sp. PAMC28562: H7F36_06180
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Entry
H7F36_06180 CDS
T10649
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7F36_06180 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vax03019
]
H7F36_06180 (recQ)
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_06180 (recQ)
Enzymes [BR:
vax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7F36_06180 (recQ)
Messenger RNA biogenesis [BR:
vax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H7F36_06180 (recQ)
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H7F36_06180 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
PRR22
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
QNK74807
UniProt:
A0A7G8W364
LinkDB
All DBs
Position
complement(1303421..1305337)
Genome browser
AA seq
638 aa
AA seq
DB search
MPVLSALPSDILSADPAQILHEIFGYEHFRGAQAEIVDHVVHGGDALVLMPTGGGKSLCY
QIPAIARQRAGHGVSIVVSPLIALMHDQVGALHEAGVNAAFLNSTLDWEQTQDVERRMLS
GEITLLYAAPERVNTPRFLQQLDSLHQRGKLSLFAIDEAHCVSQWGHDFRPEYRSLTVLH
ERYAGVPRIALTATADDLTRADIVERLQLEEARQFVSSFDRPNIRYTIVEKKEATTQLLR
FIEREHEGDAGVVYCQSRKRVEDVAVALQAAGINALPYHAGLDASIRQKHQDRFLREEGV
VMTATIAFGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGAPADAWMTYGLQDVVNQ
RRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRRVRLLGYFGEQSTPCGNCDNCLTPPQ
VWDGTDAARKLLSTIYRVQQMSGISFGAGHIMDILRGKATDKVTQFGHASVSTFGIGSDF
SEVQLRGVLRQLIATGALAVDSQAFNTLQLTDGSRAVLKGEATVMLRESVSSPVGRSGGG
SGASGKSRREKTPRGAPSPAAAKLDEAGQSRFTALKAWRAEVAREHNLPAYVIFHDATLA
AIAECAPATLEDLQGLSGIGAKKLEAYGTEVLRVVADH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgttttgtccgcactgccctccgacattctttccgccgacccagcgcagatcctc
cacgaaatctttggctacgagcactttcggggggcgcaggccgagatcgtcgaccacgtc
gtgcatggcggcgacgcgctggtgctgatgcccactggcggcggcaagtcgctctgctac
cagatcccggcgatcgcacggcagcgcgcgggccacggcgtgtcgatcgtggtgtcgccg
cttatcgcgctgatgcacgaccaggtcggcgcgctgcacgaggccggcgtcaacgcggcc
tttctgaattcgacgctcgactgggagcaaacgcaagacgtcgagcgtcgcatgctgagt
ggcgagatcacgctgctctacgccgcacccgagcgcgtcaacacgccgcgctttttgcag
cagctcgactcgttgcatcagcgcggcaagctgtcgctcttcgccatcgacgaggcgcat
tgcgtgagccagtggggtcacgatttccggcccgagtaccgctcactcaccgtgctgcac
gagcgctatgccggcgtgccgcgcattgccctcaccgccacggccgacgacctgacccgg
gccgacattgtcgagcggctgcaactcgaagaagcgcgccagttcgtctccagcttcgac
cggccgaacatccgctacaccatcgtcgagaagaaagaggcgaccacacagctactgcgc
tttatcgagcgcgaacacgaaggcgatgccggcgtggtgtattgccagtcacgcaagcgc
gtcgaagacgtggcggtcgcgctgcaggcggcaggcatcaacgcgctgccgtaccacgca
ggactcgacgcttcgatcagacaaaaacatcaggaccgcttcctgcgcgaagaaggcgtg
gtcatgaccgcgaccatcgctttcggcatgggcatcgacaagcccgacgtgcgcttcgtc
gcgcacctcgacatgcccaagaacatcgagggctactaccaggaaaccggccgcgccggt
cgggacggtgcgcccgccgatgcctggatgacctacggcctgcaagacgtggtgaaccag
cgccgcatgatcgacgagagcccggccggcgaagagttcaagcaggtgatgcgcggcaag
ctggatgcgctgctctcgctggccgaagccagcgactgccgccgtgtgcgcctgctcggc
tacttcggcgagcagagcacgccctgcggcaactgcgacaactgcttgacgccgccgcag
gtgtgggacggcacggacgccgcgcgcaagctgctcagcaccatctaccgcgtacagcag
atgagcggcatcagcttcggcgccggccacatcatggacatcctgcgcggcaaggccacc
gacaaggtgacgcagttcggtcacgcgtcggtcagcaccttcggcatcggcagtgacttc
agtgaagtgcagttgcgcggcgtgctgcggcaactgatcgcgaccggcgcactggcggtc
gactcgcaggctttcaacaccctgcagctgaccgatggctcgcgtgccgtgttgaagggc
gaggcgacggtgatgttgcgggagtcggtgtcgtcgccggtggggcgcagtggcggcggc
agtggtgcttcaggcaaatcgcgccgcgaaaagacgccgcgcggcgcgccctcgccagcc
gcagccaagctcgacgaagcggggcaatcgcgtttcaccgcgttgaaggcctggcgcgcc
gaagtggcgcgcgaacacaacctgccggcctacgtgatctttcacgacgccacgctcgcc
gccatcgccgagtgcgcacctgcgaccctggaagacctgcaggggctcagcggtatcggg
gcgaagaagctggaagcgtacgggacggaagtgctgcgggtagtggccgaccactga
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