Variovorax sp. PAMC28562: H7F36_06475
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Entry
H7F36_06475 CDS
T10649
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_06475 (radA)
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H7F36_06475 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_22
ChlI
AAA_16
Lon_C
DnaB_C
AAA_30
RecA_N
NPHP3_N
GvpD_P-loop
Rad51
SLFN-g3_helicase
NTPase_1
ATPase_2
nSTAND_NTPase5
AAA_14
AAA_29
DUF7129
nSTAND3
AAA_24
ABC_tran
NAT10_TcmA_helicase
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QNK74862
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Position
1373461..1374855
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AA seq
464 aa
AA seq
DB search
MAKDRSIYVCTECGGTSAKWLGKCPSCDAWNTLVEQAAAVQPGSANNRFGAPVFTALAGA
AELATLSDIEATDMARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQ
RAGQNAIYVTGEESGAQVALRSKRLGLDHSQVQVLAEIQLEKILATLDATRPAIAVIDSI
QTVYSDQLTSAPGSVAQVRECAAHLTRFAKASGTAVVLVGHVTKEGALAGPRVLEHMVDT
VLYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVTNPSAIFLSQHAEPVPGSV
VLVTLEGTRPMLVEIQALVDNGGPSPRRLSVGLDRDRLAMLLAVLHRHAGIACMDQDVFV
NAVGGVRISEPAADLAVMLAITSSLRGKPLPKGFIAFGEVGLAGEVRPAPRGQERLREAA
KLGFSVAVVPKANAPRKGAKEIEGLTIHPVERIEEAMDVVRQLQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagacagaagcatctacgtttgcaccgaatgcggaggcacgagcgcgaaatgg
ctcggcaaatgcccgagctgcgatgcatggaatacgctggtcgaacaggccgctgccgtg
caacccggcagcgccaacaaccgattcggcgctccggttttcaccgcgctggccggcgca
gccgaactcgccacgctgtccgatatcgaagccaccgacatggcacgcacgccgaccggg
ctcgacgagctggaccgcgtgctcggcggcggcatcgtgtcgggcggcgtcactctcatt
ggcggcgatccggggatcggcaagtcgacgctgctgctgcaggccgtcgatgcgttgcag
cgagccgggcaaaacgcgatctacgtcaccggcgaagaaagcggcgctcaggttgcgctg
cgctccaaacgcctggggctcgatcactcccaggtgcaggtgctggccgagatccagctc
gaaaaaatcctagccacgctcgacgcaacgcggccggcgatcgcggtcatcgattcgatc
cagaccgtctactcggatcagctcacgtctgcgcccggctccgtcgcgcaggtgcgcgag
tgcgcggcgcacctgacgcgcttcgccaaggccagcggcactgcggtggtgctggtcggc
cacgtcaccaaagaaggcgcgctggccggcccgcgcgtgctggagcacatggtcgacacg
gtgctgtacttcgagggcgacacgcactcgagtttccggctggtgcgcgccatcaagaac
cgcttcggcgcggtcaacgagatcggtgtcttcgccatgaccgagcgcgggctgaagggc
gtgaccaacccgagcgcgatcttcctgagccagcacgcggagccggtgcccggcagcgtg
gtgctggtcactctcgaaggcacgcggccgatgctggtcgaaatccaggcgctggtcgac
aacggtgggccgagcccgcggcggttgtcggtcggcctggaccgcgaccgcctcgccatg
ctgctggcggtgctgcaccgtcatgcgggcatcgcctgcatggaccaggacgtgttcgtc
aatgcggtcggtggcgtgcgcatcagcgagccggcggccgacctggccgtgatgctggcc
atcacttcgagcctgcgcggcaagcccttgcccaagggctttatcgcgttcggcgaagtc
ggcctggccggcgaagtgcggccggcgccgcgcggccaggagcgcctgcgagaagccgcc
aagctcggcttcagcgtggcggtcgtcccaaaagccaacgcgcccagaaagggcgcgaag
gaaatcgaagggctgaccattcacccggtcgagcgcatcgaggaagcgatggacgtggtg
cggcagcttcagtag
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