Variovorax sp. PAMC28562: H7F36_07310
Help
Entry
H7F36_07310 CDS
T10649
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vax03009
]
H7F36_07310 (rsmI)
Enzymes [BR:
vax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
H7F36_07310 (rsmI)
Ribosome biogenesis [BR:
vax03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
H7F36_07310 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QNK75009
UniProt:
A0A7G8W3R6
LinkDB
All DBs
Position
complement(1541673..1542659)
Genome browser
AA seq
328 aa
AA seq
DB search
MASITAASFGAALSAAGDAAGRQDYPQSTLYVVATPIGNLADITLRALHVLQMVDAVACE
DTRHTQSLLRAYGIDRPGGQLLALHQHNEAEGAQGVIARLSQGERIAYVSDAGTPGVSDP
GARLVAAVRAAGLRVLPLPGASAVTTLISAAGLVAGGDDSSAFVFAGFLPSKAGERDTTV
QALALEPRAVVLLEAPHRIEAVARALTVLGDRRITIGRELTKQFEEIVTLAASELPAWFT
AGRDRTRGEFALALHPMAVAVDDGAEGERVLRLLLEELPVKTAVRLAAEISGAPRNALYD
TALRIRKDGSKNDGDHHTNSDLHDEPND
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttggcttcaatcaccgccgcgtcgttcggcgcagccctctcggccgctggcgatgccgcg
ggcaggcaggattatccccagagcacgctctacgtcgtcgctacgccgatcggcaacctt
gccgacatcacgttgcgcgcgctgcatgttttgcagatggtcgacgctgtcgcctgcgaa
gacactcggcatacgcaaagcttgttgcgggcctatggcatcgaccgacctggcggccag
ctgctcgcgctgcaccagcacaacgaagccgaaggggcgcagggcgtcatcgcacgcctg
tctcaaggcgaacgcatcgcgtacgtaagcgacgccggcacgccgggcgtgagcgatccc
ggcgcgcggctggtggctgccgtgcgcgcagccgggcttcgcgtgcttcccttgccgggc
gcgagcgccgttaccacgctgatcagcgctgcgggtctcgtcgcgggtggtgacgacagc
agcgctttcgtcttcgcgggctttctgccaagcaaggctggcgaacgcgacacgaccgtg
caagcgctcgcgttggaaccgcgcgctgtcgtcttgctcgaagcaccgcaccgcatcgaa
gccgtggccagagcgctgaccgtgctgggcgaccggcggatcactatcggtcgtgaactg
accaagcaattcgaagagatcgttaccctggctgccagcgagctaccggcgtggttcacc
gcgggacgagaccgcacgcgcggggaattcgcactcgctttgcatccgatggcagtcgct
gtcgatgatggcgcggaaggcgaacgtgtgctgcgactgctgctcgaagagctgccggtg
aagaccgccgtgcgcctcgccgcggagataagcggcgcgccgcgcaacgcgctctacgac
actgcgctgcgcatccgcaaagacgggagcaaaaatgatggcgaccaccacacgaacagc
gatctccacgacgagccgaacgattag
DBGET
integrated database retrieval system
