Variovorax sp. PAMC28562: H7F36_08345
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Entry
H7F36_08345 CDS
T10649
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax00521
Streptomycin biosynthesis
vax00523
Polyketide sugar unit biosynthesis
vax00525
Acarbose and validamycin biosynthesis
vax00541
Biosynthesis of various nucleotide sugars
vax01100
Metabolic pathways
vax01110
Biosynthesis of secondary metabolites
vax01250
Biosynthesis of nucleotide sugars
Module
vax_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H7F36_08345 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
H7F36_08345 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
H7F36_08345 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
H7F36_08345 (rfbB)
00525 Acarbose and validamycin biosynthesis
H7F36_08345 (rfbB)
Enzymes [BR:
vax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
H7F36_08345 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Cellsynth_D
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QNK75194
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All DBs
Position
1744812..1745891
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AA seq
359 aa
AA seq
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MILVTGGAGFIGANFVLDWLAQSDEAVVNLDKLTYAGNPETLASLKGNPKHVFVQGDIGD
SALLDRLLAEHKPRAIVNFAAESHVDRSIHGPEDFVQTNVLGTFRLLESVRGHWAALPAD
QQAAFRFLHVSTDEVYGSLSATDPAFTEDHKYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPFHFPEKLIPLMIVNALEGKPLPVYGDGMQVRDWLYVKDHCSAIRRVLEA
GRLGETYNVGGWNEKPNIEIVNTVCALLDELRPKAGGKSYREQITYVTDRPGHDRRYAID
ARKIEKELGWNPADTFDTGIRKTVEWYLANGEWVRNVQSGAYREWVEKQYDSKPTKAPS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggttacaggcggtgccggcttcattggcgccaacttcgtactcgattggctc
gcgcaaagcgacgaggccgtcgtcaatctcgacaagctcacttacgccggtaaccccgag
acgctcgcgtcgctgaagggcaaccccaagcacgtcttcgtgcagggcgacatcggcgac
agcgccttgctcgaccgcctgctcgccgaacacaagccgcgcgcgatcgtcaacttcgcg
gccgagtcgcatgtcgaccggtcgattcacgggcctgaagacttcgtgcagaccaacgtg
ctcggcaccttcaggttgctcgaatccgtccgcggtcactgggctgcattgccagcagat
caacaagccgcctttcggtttctgcacgtctcgaccgacgaggtctacggctctttgtcg
gcgaccgacccagccttcaccgaagaccacaagtacgagcccaacagcccatattcggcc
agcaaggctgccagcgaccatctggtgcgcgcatggcaccacacctacggcttgccggtg
ctgacgaccaattgctcgaacaactacgggccgttccatttccccgaaaaactcatcccg
ctgatgatcgtcaacgcgctcgaaggcaagccgctgccggtgtacggagacggcatgcag
gtgcgcgactggctgtacgtcaaggaccattgcagcgccatccgccgcgtgctggaagcg
ggccggttgggtgaaacctacaacgtcggggggtggaacgagaagccgaacatcgagatc
gtcaacacggtgtgcgcactgctcgacgagctgcggcccaaggccggcggcaagagttac
cgcgaacagatcacctacgtgaccgatcgccccggccacgatcgccgctacgccatagac
gcacgcaagatcgaaaaagagctcggctggaaccccgccgacaccttcgacaccggcatc
cgcaagacggtggagtggtacttggccaatggcgaatgggtgcgcaatgtgcagagcggt
gcgtatcgcgaatgggtcgaaaagcagtacgactctaaacccacgaaggcgccctcatga
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