Variovorax sp. PAMC28562: H7F36_09950
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Entry
H7F36_09950 CDS
T10649
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax00300
Lysine biosynthesis
vax00470
D-Amino acid metabolism
vax01100
Metabolic pathways
vax01110
Biosynthesis of secondary metabolites
vax01120
Microbial metabolism in diverse environments
vax01230
Biosynthesis of amino acids
Module
vax_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H7F36_09950 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H7F36_09950 (lysA)
Enzymes [BR:
vax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
H7F36_09950 (lysA)
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Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QNK75477
UniProt:
A0A7G8W534
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All DBs
Position
complement(2116393..2117697)
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AA seq
434 aa
AA seq
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MTAELQEPATLPGHPHIARRDDTLQIEAMSLAALAREHGTPLFVYSKQWMLDALGAYQRG
FDGRDALICYAMKANSSLGVLRVFAEAGCGFDIVSGGELSRALAVGADPARIIFSGVGKT
RAEMKQALDAGIGCFNVESEAELDVLDEVASTSNQRARISIRINPNVDPKTHPYISTGLK
GNKFGIAHDRALHAYRHAAKLPGLDVVGIDCHIGSQITEMSPYLDACERILDLVEAIEAA
GVPIHHLDFGGGLGIDYNGEVPPAADALWKQLLARLDARGFGNRKLIIEPGRSLVGNAGV
CVTEVLYVKPGEDKNFCIIDAAMNDLPRPAMYQAFQNIVPLQMRSGGSDDGTIYDVVGPI
CESGDWIGRDRSLNVQAGDLLAVLSSGAYCMSMSSNYNTRGRAAEVMVSGDRATLIRRRE
TLEDQLRSELPREG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcagagctccaggaacccgcgacgcttccaggccatccccacatcgcgcgacga
gacgacacactgcaaattgaggccatgtcgctcgctgcgctggcgcgcgaacacggcacg
cctcttttcgtctattcgaagcagtggatgctcgatgcgctcggcgcttatcaacgcggc
ttcgacggcagggacgcgctgatctgttatgcgatgaaggccaattcgtcgctcggcgtg
ctgcgcgtctttgccgaagccggttgtggcttcgacatcgtgtcgggcggtgagctctcg
cgtgcactcgcggtcggtgccgatccggcccgcatcattttttccggcgtcggcaagaca
cgcgcagagatgaagcaggcgctggacgccggcatcggttgcttcaacgttgaaagcgaa
gccgaactcgacgtgttggacgaagtggcatcgaccagcaaccaacgagcccgcatcagc
attcgcatcaacccgaacgtcgaccccaagacgcatccgtatatctctacgggtctcaag
gggaacaagttcggcatcgcgcacgaccgtgcactgcacgcataccgccatgcggcgaag
ctgccaggactggacgtcgtaggaatcgattgccacatcgggtcgcagatcaccgagatg
tctccttacctggatgcgtgcgaacgcatcctcgatctggtcgaagccatcgaagccgcg
ggcgtaccaatccatcatcttgacttcggtggtggcttgggcatcgactacaacggagag
gtgccaccggctgccgatgcgctgtggaagcagttgctggcccggctcgatgcgcgcggt
ttcggcaatcgcaagctgatcatcgaacccggtcgttcactggtgggcaacgccggggtg
tgcgtgacagaagtgctctacgtcaagccgggtgaagacaagaacttctgcatcatcgac
gcggcgatgaatgacctgccgcgtcctgcgatgtaccaggcctttcagaatatcgtgccg
ctgcagatgcgatctggtggatcggatgacgggacgatttacgacgtggtcggtccgatc
tgcgaaagcggcgactggatcggccgggaccgctcgctcaatgtgcaagccggcgatctg
ctcgcagtgctctcttcaggcgcgtattgcatgagcatgtcgagcaactacaacacgcga
ggccgcgccgccgaagtgatggtcagcggcgaccgagccacattgatccgccgtcgcgaa
acgctcgaggatcagctccgcagcgagcttccccgcgaaggctga
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