Variovorax sp. PAMC28562: H7F36_10300
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Entry
H7F36_10300 CDS
T10649
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vax02044
]
H7F36_10300
02035 Bacterial motility proteins [BR:
vax02035
]
H7F36_10300
Secretion system [BR:
vax02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
H7F36_10300
Bacterial motility proteins [BR:
vax02035
]
Pilus system
Pilus assembly proteins
H7F36_10300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
T4_gp9_10_N
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
QNK75539
LinkDB
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Position
complement(2180360..2181580)
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AA seq
406 aa
AA seq
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MATAASTRTLKEFVFEWEGKDRNGKAVRGEVRAAGENQVQAALRRQGVLASKIKKRRMRS
GKSIKPKDIAIFTRQLATMMKAGVPLLQSFDIVGRGNANPSVSKLLNDVRSDVETGTSLS
SAFRKFPKYFDNLYCNLVEAGEAAGILEELLDRLATYMEKTEAIKSKIKSALMYPASVVV
VAFVVVAIIMIFVIPAFKSVFSSFGADLPAPTLIVMGISEFFVAYWWLIFGVIGGGLYFF
MQAWKRNERVQKVMDRVLLKLPIFGALIDKSCVARWTRTLSTMFAAGVPLVEALDSVGGA
SGNSVYADATVKIQQEVSTGTSLTSAMTNANLFPSMVLQMTAIGEESGSIDHMLGKAADF
YESEVDDMVAGLSSLMEPIIIVFLGVLIGGIVVSMYLPIFKLGQVV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgcatcgacacgcactcttaaagaattcgtcttcgaatgggaaggcaag
gaccgcaatggcaaggctgtccgcggcgaagtgcgcgcggcgggcgagaaccaagtccag
gccgcgttgcgccgccagggcgtgctcgcatcgaagatcaagaagcgccggatgcgctcc
ggcaagtcgatcaagcctaaagacatcgccatcttcacgcgccaactcgcgaccatgatg
aaagcaggcgtgccgcttttgcagtcgttcgacatcgtgggccgaggcaacgccaacccc
agcgtttccaaactgctcaacgacgtgcgcagcgacgtggaaacaggcacttcgctctcc
tcggcgttccgcaagttcccgaagtattttgacaacctctactgcaatctggtcgaggca
ggtgaagcggccggtattttggaggagttgctcgaccgcctggccacttacatggaaaag
accgaagcgatcaagtcgaagattaaatcggctttgatgtatcccgcatcggtcgttgta
gtggccttcgtggtggttgcgatcatcatgattttcgtgatcccggcgttcaagtcggtt
ttcagttcattcggggcggacctgccggctcccacgttgatcgtgatggggatcagcgaa
tttttcgtggcttactggtggttgatcttcggcgtcatcggcggcggtctgtactttttc
atgcaggcatggaagcgcaacgaacgcgttcaaaaggtgatggaccgggtgctgctgaag
ttgcctatcttcggtgcgcttatcgacaaatcctgcgtggcacgatggactcgcacgttg
tcgacgatgttcgcagccggcgtgcctttggtcgaggcgctcgattccgtggggggcgct
tcgggcaactcggtgtacgccgacgccaccgtcaagattcagcaagaggtttctaccggc
accagcctgacgagcgcaatgaccaacgcgaacctgttcccatcgatggttttgcagatg
acggccatcggcgaagagtcgggctccatcgatcacatgctcggcaaggcggccgacttc
tacgaatccgaagtcgacgacatggtcgctggcctgtcgagcctgatggagcccatcatc
atcgtgtttttgggcgtgctcatcggcggcatcgtggtgtccatgtacctgcccatcttc
aagctcggtcaagtcgtctga
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