Variovorax sp. PAMC28562: H7F36_10810
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Entry
H7F36_10810 CDS
T10649
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H7F36_10810 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vax01007
]
H7F36_10810 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vax03016
]
H7F36_10810 (serS)
Enzymes [BR:
vax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
H7F36_10810 (serS)
Amino acid related enzymes [BR:
vax01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
H7F36_10810 (serS)
Transfer RNA biogenesis [BR:
vax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
H7F36_10810 (serS)
Prokaryotic type
H7F36_10810 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF16
SPC25_N
ZapB
TMF_TATA_bd
DUF7310
Motif
Other DBs
NCBI-ProteinID:
QNK75629
LinkDB
All DBs
Position
2279867..2281210
Genome browser
AA seq
447 aa
AA seq
DB search
MLDITLLRKDLPSVVARLETRKANQTFLDVHAFTALEAERKILQVRTEELQARRNTLNKQ
IGPLKAKGESVDALMTEVNALKTEQEAQGGRLEAIQPELQALLLAVPNLPHASVPVGTDE
HGNVEVRRWAPQGGAGAAATPLGFEAKDHVDLGEPLGLDFEMGTKLAGSRFSVLKGSIAR
LHRALAQFMLDMQTEKHGYTECYVPYIVNAASLSGTGQLPKFEGDLFAAKKGGQDGEPVP
DNQALYLIPTSEVPLTNFVRDEVVAESTLPIKLTAHSPCFRSEAGSAGRDTRGMIRQHQF
DKVEMVQITHPDRSYEALEAMTGHAEAVLQALELPYRVVLLCTGDMGFGSSKTYDLEVWL
PAQDTYREISSVSNCEAFQARRLQARFKNAQGKNELVHTLNGSGLAVGRTLVAVLENHQN
ADGSITVPRALHPYLGGLETLRASARI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcaccctgctccgcaaggacctcccctcggtcgttgcccgactcgaaacc
cgcaaagccaaccagaccttccttgatgtccacgccttcaccgcgctggaggccgaacgc
aagatccttcaggtccgaaccgaagagttgcaggcacggcgcaatacgctcaacaagcag
atcggcccactgaaagccaagggcgaatctgtcgatgcattgatgaccgaggtcaacgcg
ctcaagaccgagcaagaggcgcaaggcggtcgcctcgaagccatccagccggaattgcag
gcgctgttgctggcagtgcccaacttgccgcatgccagcgtgccggtcggcaccgacgag
cacggcaatgtcgaagtgcgtcgctgggcgccgcaaggcggtgccggcgccgcggccacg
ccgctcggcttcgaagcgaaagaccatgtcgacctgggcgaaccgctcggcctcgacttc
gaaatgggcaccaagctcgctggttcgcgcttcagcgtgttgaaagggtcgatcgcccgg
ctgcatcgcgcgctcgcacagttcatgctcgacatgcagacagagaaacacggctacacg
gaatgctatgtgccgtacatcgtcaacgcggcatcgctcagcggcaccggccagttgccc
aagttcgagggcgaccttttcgccgccaaaaagggcgggcaagacggcgagccggtgcca
gacaaccaggcgctctacctcatcccgaccagcgaagttccgctgaccaacttcgtgcgc
gatgaggtcgtggccgagtcgacgttgccgatcaagctgaccgcgcactcgccgtgtttt
cgctctgaagccggcagcgccgggcgcgacacgcgcggcatgatccggcagcaccagttc
gacaaggtcgagatggtgcagatcacgcaccccgatcgcagctacgaagcgctcgaagcc
atgaccggccatgccgaggcggtgctgcaggcgctggagttgccgtaccgcgtggtgctg
ttgtgcaccggcgacatgggctttggttccagcaagacctacgacctggaagtctggttg
ccggcgcaggacacgtaccgcgagatcagctcggtctccaactgcgaagcttttcaggcg
cgccgattgcaggcgcggttcaagaacgcgcaaggcaagaacgaactcgtgcacacgctc
aacggctctgggctggcggtcggacgcacgctggtcgcagtgctcgaaaatcatcagaac
gccgatgggtccatcaccgtgccgcgagcgttgcatccttacctcggcggcctcgaaacg
ctccgagcctctgctagaatctga
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