Variovorax sp. PAMC28562: H7F36_11830
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Entry
H7F36_11830 CDS
T10649
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax03420
Nucleotide excision repair
vax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H7F36_11830
03430 Mismatch repair
H7F36_11830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_11830
Enzymes [BR:
vax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H7F36_11830
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H7F36_11830
MMR (mismatch excision repair)
Other MMR factors
H7F36_11830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QNK75901
UniProt:
A0A7G8W6A8
LinkDB
All DBs
Position
2505800..2508181
Genome browser
AA seq
793 aa
AA seq
DB search
MFIDLATASESAESPLLQHLNPEQRAAVALPAGNALILAGAGSGKTRVLTTRIAWLLQTG
QVSPGGILAVTFTNKAAKEMTARLMAMLPVNVRGMWIGTFHGLCNRLLRAHWKLAGLPST
FQILDTQDQLSAIKRLMKQYAVDDERFPAKQTQWFIAGAKEDGLRPRDVEVRSDDDRKKV
ELYQLYEEQCQREGVVDFGELMLRSYELLRDNDPIREHYQRRFRHILIDEFQDTNRLQYA
WIKMLSGNIVDGTFIPGDNSVIAVGDDDQSIYAFRGARVGNMADFVREFHVTHQVKLEQN
YRSYSNILDSANELISHNKKRLGKNLRTDQGPGEPVRVYESTSDFAEAQWMVEEMRQLVR
DGFDRKEMAVLYRSNAQSRVIETALFNAAVPYRVYGGLRFFERAEIKHALAYLRLLENKD
DDTSFLRVVNFPPRGIGARTIEQLQDAARAAGKSMHDSVGAVAGKAGSNLTGFVAKIDVL
REQTQGISLREIIDLVLDHSGLVEHYKADREGADRIENLEELVNAAESFVTQEGFGRDAV
ALPIDELRQSLVSQGLDPNLPVIDEPLAPDSETGETLSPLAAFLTHAALESGDNQAKTGQ
DAVQLMTVHAAKGLEFDCVFITGMEEGLFPHENSINDYESLEEERRLAYVAITRARKRLY
LSHSQTRMLHGQTRYNVRSRFFDELPEGALKWLTPKNQGFTPSAFGYGGGYATSRPVGGA
GFSKDSFASPPVPPQKTAPSHGLRSGMQVFHNKFGEGTVLGLEGTGDDARAQINFPRHGV
KWLALSVAKLTPV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcgatctcgcgactgcctccgaatcagcggaatcgccgctgctccagcacctc
aaccccgagcaacgcgccgccgtggcactgccggccggcaatgccctcattctggccggc
gccggctccggcaagacccgcgttctcactacgcgcatcgcctggctgctgcaaaccggt
caagtgtcgccgggcggcatcttggccgttaccttcaccaacaaggccgccaaggaaatg
accgcgcggctgatggccatgctgccggtgaatgtgcgcggcatgtggatcggcaccttt
cacgggctgtgcaatcgcttgttgcgcgcgcattggaagctggccggcctgccctctacc
tttcagatcctcgacacgcaagaccagctttcggccatcaagcggctgatgaagcagtac
gcggtcgacgacgagcgctttccggccaagcagacgcaatggttcattgccggcgccaag
gaagacggcttgcgcccacgcgatgtcgaagtgcgcagcgacgacgaccgcaagaaggtc
gagctgtatcagctctacgaagagcagtgccagcgcgaaggcgtggtcgatttcggcgaa
ctcatgctgcgcagctacgagctgctgcgcgacaacgatccgattcgcgagcactaccag
cggcgcttccggcacatcctgatcgacgagtttcaggacaccaaccgcctgcaatatgcg
tggatcaagatgctgtcgggcaacatcgtcgacggcaccttcatccccggcgacaacagc
gtgatcgcagtgggtgacgacgaccagagcatctatgcgtttcggggcgcgcgcgtcggc
aacatggctgatttcgtgcgcgagttccatgtgacgcaccaggtcaagctggagcagaac
taccgcagctacagcaacatcctcgactcggccaacgagctgatcagccacaacaagaag
cggctcggcaagaacctgcgaacagaccagggccccggcgagccggtgcgcgtgtacgag
tcgaccagcgatttcgccgaggcgcaatggatggtcgaagaaatgcgccaactggtgcgc
gatggcttcgaccgaaaagagatggcggtgctctaccgcagcaatgcgcagagtcgcgtg
atcgaaacggcgctcttcaacgcggccgtgccgtaccgcgtctacggcggcttgcgattt
ttcgaacgcgccgagatcaaacatgcgctggcgtatttgcggctgctcgaaaacaaggat
gacgacaccagctttctgcgcgtcgtcaactttccgccgcgcggcatcggtgcccgcacc
atcgagcaattgcaggacgcggcgcgtgcagcgggcaagtcgatgcatgactcggtcggt
gcagtggccggcaaggccggctccaacctgaccggcttcgtcgccaagatcgacgtgctg
cgggagcagacgcaaggcatcagcctgcgcgagatcatcgatctggtgctggaccacagc
gggcttgtcgagcattacaaggccgaccgcgaaggcgccgaccgcatcgagaatctggaa
gagctggtcaacgcggccgagagcttcgtcacgcaggaaggattcggccgcgatgcggtg
gcgctgccgatcgacgagctgcggcagtcgctcgtcagccaggggctcgacccgaatttg
cctgttatcgatgagccgctggcgcctgattcggaaaccggcgaaacgctgagtccgctg
gccgcgttcctcacgcacgcggcgctggagtcaggcgacaaccaggccaagacaggccaa
gacgcagtgcaactgatgacggttcatgcggccaagggcctcgagttcgattgcgtgttc
atcaccggcatggaagagggcctgtttccgcacgaaaactcgattaacgactacgagagc
ctcgaggaagaacgccggctggcgtacgtcgcgatcacccgcgcccgcaaacgtctgtac
ctgagccattcacagacgcgcatgctgcacggccagacgcgctacaacgtgaggagccgc
ttcttcgacgagctgcccgaaggcgcgttgaagtggctgacgccgaagaatcagggcttt
acgccatcggcgttcggctatggcggcggctatgcgacgtcacgtccggtgggcggcgct
ggcttctcgaaagattcgttcgccagcccaccggtgccaccgcaaaaaactgcaccgtcg
cacggcctgcgctcgggtatgcaggtgttccacaacaagttcggagagggcaccgtgctg
ggcctcgaaggcaccggcgacgacgcgcgtgcacagatcaactttccgcgtcacggcgtg
aaatggttggcgctatcggtggcgaaactcacccccgtttga
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