Variovorax sp. PAMC28562: H7F36_12160
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Entry
H7F36_12160 CDS
T10649
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vax03032
]
H7F36_12160
03036 Chromosome and associated proteins [BR:
vax03036
]
H7F36_12160
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_12160
DNA replication proteins [BR:
vax03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H7F36_12160
Chromosome and associated proteins [BR:
vax03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H7F36_12160
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H7F36_12160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QNK72008
UniProt:
A0A7G8VV65
LinkDB
All DBs
Position
complement(2579396..2579710)
Genome browser
AA seq
104 aa
AA seq
DB search
MTRSDLVEELAARFAQLTHRDAEYAVKTILDAMSEALVRGHRIEIRGFGSFSVNRRPPRI
GRNPRSGESVQIPEKRVPHFKPGKALREAVDARTAELDAASRKA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgacacgctctgacctcgtcgaagaacttgcagcccgattcgcgcaactgacacatcgc
gatgccgaatacgcggtcaagacgattctcgacgccatgagcgaagcgctcgtgcgcggg
catcgcatcgagattcgcggcttcggcagcttctcggtcaatcggcgaccgccgcgcatc
ggacgcaatccgcgctcgggcgagagcgtgcagatccccgaaaagcgggtgccgcatttc
aagccgggcaaggcactgcgcgaagcggtagacgctcgcaccgccgagctcgacgccgcg
agccgcaaggcctga
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