Variovorax sp. PAMC28562: H7F36_12540
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Entry
H7F36_12540 CDS
T10649
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H7F36_12540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_12540
Transporters [BR:
vax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H7F36_12540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
DcuC
CitMHS
Motif
Other DBs
NCBI-ProteinID:
QNK72073
LinkDB
All DBs
Position
complement(2655850..2657202)
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AA seq
450 aa
AA seq
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MALTLLSLSFIVFLLLGMPVAFAIGLSCLLTFAFEGLPFETAIQMMVSGMNVFSFLAIPF
FIFSGELMLHGGIADKIVAFARSLVGHWKGGLGLANVVASTLFGGVSGSPVADTSAMGGV
MIPIMKREGYSAAYAVNVTTHASLSGALMPTSHNMIIYAFAAQAAVGTIGGHTIKGVSIG
DLMFAGLIPVFWIMVCMLVAAYWQAAKYGFPRRPDGSTMIERFPGWKAVLRTFIASIPGL
MVIVIILVCVMEGIATATEAAAIAVTYSLLLTVVIYRTMTKQKLFKSLAKASKTTGVILL
LIGVSNMLRYQMAYLEIPDTIEAALLAATTTPWLMLLYINIIQIFLGIFLDMAAHILITT
PLFLPLAIQMGVGPVQFGMMLLLNCALGLVHPPVGTVQFIGCAIGKISIGEATKTAWPYY
LAIFIAITLVTYVPAFSTWLPSLITGHVVL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcattgactcttctctcgctcagcttcatcgtctttttgctgctcggcatgccggtc
gcttttgcgatcggattgagttgcctcttgaccttcgcgttcgaaggcctgcccttcgag
actgccatccagatgatggtgtcgggcatgaacgttttctctttcctggcgataccgttc
ttcatcttttccggggagttgatgctgcacggcggcatcgccgacaagatcgtcgccttc
gcgcgcagcctggtcggccattggaagggcggcctcggcctcgcgaacgtggtggcgtcg
acgctgttcggtggcgtctcggggtcgccggtggcagacacctccgccatgggtggcgtg
atgatcccgatcatgaagcgcgagggctacagcgcggcttatgccgtcaacgtgacgacg
cacgcatcgctctccggcgcattgatgccgacatcgcacaacatgatcatctatgccttt
gcagcgcaagcggcagtaggcacgatcggcggccacaccatcaagggcgtgtcgatcggc
gacctgatgttcgccggcctgatcccggtgttctggatcatggtttgcatgctggtcgcc
gcctactggcaagccgccaagtacggctttccccggcgtcccgacggctccacgatgatc
gaacgcttcccgggctggaaagcggtgctgcgcactttcatcgcgtcgattccgggcctg
atggtgatcgtcatcatcctggtgtgcgtgatggaaggaatcgcgacggcaacggaggcg
gcggccatcgcggtcacttattcgctgctgctcacggtggttatctaccgcacgatgacc
aagcaaaagctcttcaagtcgttggccaaagcatcgaagacaacgggcgtgatcctgctg
ctgatcggcgtgtcgaacatgctgcgctaccagatggcgtacctggaaattccggacacc
atcgaggccgcgctgctggccgctaccacgacgccttggctgatgctgctctacatcaac
atcatccagatctttctggggatcttcctggacatggcggcgcacatcctgatcacgacg
ccgctgttcttgccgctggccatccagatgggcgtcgggccggttcaattcggaatgatg
ctgctgcttaattgcgcgttgggcctggtgcatccgccggtggggacggtgcagttcatc
ggttgtgcgatcggcaagatatcgatcggcgaggccaccaaaacggcttggccgtattac
ctcgccatcttcatcgccatcacgttggtgacgtacgtgccggcgttttcgacctggctg
ccgtcgctgatcaccgggcacgtggttctgtga
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