Variovorax sp. PAMC28562: H7F36_12700
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Entry
H7F36_12700 CDS
T10649
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax03410
Base excision repair
Brite
Enzymes [BR:
vax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
H7F36_12700
Transcription factors [BR:
vax03000
]
Prokaryotic type
Helix-turn-helix
AraC family
H7F36_12700
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7F36_12700
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QNK72096
UniProt:
A0A7G8VVF3
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Position
complement(2686372..2688000)
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AA seq
542 aa
AA seq
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MSNLTAPPSPANGAPLENDACYLAMKTHDARFDGSFYTAVTSTGIYCRPVCRVRTPRREN
CRFFRHAAQAEAEGFRPCLRCRPELAPRAASWSTEDASRILALQAARLIDEPDAWSHGDD
DSGPGAAQIAAKLGVSDRHLRRIFETQFGVSPLQYLQTRRLLAAKQLIADTRLPMTQVAL
ASGFASVRRFNDAFVAHYGLNPSALRRAGGNAEAREGQPIEVRLGYRPPYDTAAMIGFFE
RRALRGVEAVSGAGDGARFARTVRVQQGTRVHAGWLQLRFDTEREQLMLSVGDSLASVLP
IVIARVRAMFDLDADPIAINAALHASFPDGDGMRVPGTADGFELAVRAVLGQQITVAAAR
TIGSRLVQAFGEPIATPIDGLDRLFPTPAAIAAASGDALGQLGIVRQRQGALQALAREVI
EGRLALHAGADVPSTLVALQALPGIGDWTAQYIAMRALRWPDAFPAGDVALQKALGVTTA
RAAAEASQAWRPWRGYAVLRAWHTLPASAAPGITTRLHPPHSLQPRQYKNQRRGQAPSPE
TP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccttaccgctccaccgtcaccagccaacggcgcgccgctggagaacgacgcc
tgctacctcgccatgaagacgcacgacgcacgcttcgatggctcgttttataccgcagtg
acatcgaccggaatctactgccggccagtctgccgggtgcgcaccccgcggcgcgaaaac
tgccgcttttttcgccatgccgcgcaagccgaggccgaagggtttcgcccctgcctgcgc
tgccggccagaactggcaccgcgcgccgcgagctggtcgaccgaagatgcgtcgcgcatc
ctcgcgttgcaggcagcgcgcctcatcgacgagccggatgcgtggtcgcacggtgacgat
gacagcggccccggcgcggcacagattgcggcgaagctgggggtgagcgaccgccacttg
cggcgcatcttcgagacgcagttcggcgtgtcgccgttgcagtatctgcagacgcggcgc
ttgctggctgccaagcaactcatcgccgatacgcgcctgccgatgacacaggtggcgctg
gccagcggcttcgccagcgtacgccgcttcaacgatgctttcgtcgcgcactacggcctg
aacccgagcgccttgcggcgtgccggcggcaacgccgaggcccgcgaaggccagcctatc
gaagtgcgactcggttaccgaccgccgtacgacaccgcggcgatgatcggcttcttcgag
cgccgcgcactgcgcggtgtcgaggcggtgtcgggcgccggcgatggcgcgcgcttcgca
cgcacggtgcgtgtccagcagggcacgcgcgtccatgcggggtggctccagttgcgcttc
gacaccgagcgcgagcagttgatgctgtcggtgggcgattcgctcgcgtcggtgctgccg
atcgtcatcgcccgggtgcgtgcgatgttcgatctcgatgccgatccgatcgccatcaac
gcagcgctgcacgccagctttccagacggcgacggcatgcgcgtgccgggcacggccgac
ggcttcgagttggcggtgcgcgcggtgctcgggcagcagatcaccgtggccgcggcacga
acgatcggctcgcggctggtccaagctttcggcgaaccgatcgccacaccgatcgacggg
ctcgaccggctctttccgacaccggctgcgatcgccgcagcgagcggcgatgcgctgggc
cagctcggcatcgtgcggcaacgccagggcgccttgcaggcgctggcgcgcgaagtcatc
gaaggccggctggcactgcacgcgggcgccgatgtgccgtcgacgctcgtcgccttgcag
gctttgcccggcattggcgactggacggcgcagtacatcgcgatgcgcgcattgcggtgg
cccgacgcgtttccggctggcgacgtcgcgctgcaaaaggcgctcggcgtgacgaccgcg
cgcgctgcagcggaggcatcccaagcctggcggccatggcgcggctacgcggtgctgcgc
gcctggcacacgctgcccgcgagcgcagcgccgggcattacgactcggctacatccgcca
cattcgctacagccaaggcaatacaagaaccaacgacgaggacaggcaccatcgcctgag
acaccatga
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