Variovorax sp. PAMC28562: H7F36_14540
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Entry
H7F36_14540 CDS
T10649
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H7F36_14540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_14540
Transporters [BR:
vax02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
H7F36_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
IstB_IS21
RsgA_GTPase
AAA_33
AAA_22
AAA_25
nSTAND_NTPase5
AAA_5
DUF1005
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QNK72434
LinkDB
All DBs
Position
3089982..3091763
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AA seq
593 aa
AA seq
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MSTARKDRVSLILRPFLATQPRALLLGALLAAITVLTGMALLGLSGWFITATALAGANVA
TAFMFDVFMPSAGIRLLAVGRTASRYGERLVTHDATFAVLAALRVQLFRGWARAGAAREL
LMRPSRVLFRLTSDIDALESLYLRLVVPAMAALGAAVLAGVVLGFMHIGLGIALAVWLVA
SGWGIAFVVARRARRPSVQRAHAIEVLRARAVDLVAGQSDLIMAGRIDAQRAALADADRR
LAAADLALNRLEANAGAAYGMAGTISLVAVLLAVGVLVGEGRIGAPAAALALLVALTAVE
PFAAMRRGALDAGRTWLAVRRLAPRMALDDMQSKPFTSGSIAPSAPSAPTASSESVGAAL
SNAPASLTSGIALRFHEITAAPSRAGSDVLHGVSLRIDVGERVALIGPSGAGKSTLLAIA
AGELTPRSGTAVMLPACLLTQRTELFQDSLRDNLRLADPSADDARLWHALEAAGLAPDIR
TAAAGLDMRLGEGGLGLSGGQSRRLALARLLLRPTDFWLLDEPTEALDTEIARDVLQRLA
QHAGPRTVLIATHLRREAALADRLVRMEAGHIVADLRRGTPGFEAALRALRPD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcccgcaaggatcgcgtcagtctgatcctgcgcccctttcttgccacgcaa
ccccgcgcattgctgctcggcgctctgcttgctgcaatcaccgtgctcaccggcatggcg
ctgctcggcctttccggctggttcatcaccgcgacggcgctggccggtgccaacgtcgcg
accgcgttcatgttcgacgtcttcatgccttcggccggcatccgcttgctggcggtcggc
cgcacggcctcgcgctacggcgagcgactggtcacgcacgacgcgaccttcgccgtgctg
gcggcgttgcgcgtgcagctgttccgcggctgggcgcgtgccggtgccgcgcgcgagttg
ctgatgcgcccatcgcgtgtgctgttcaggctgacctcggacatcgacgcgctcgagtct
ttgtatttgcggctcgtcgtgcccgcgatggcggcattgggcgctgcggtgctggccggc
gtcgtcctcggcttcatgcacattggcctgggcatcgcgttggcggtatggctcgtcgca
agtggttggggcatcgccttcgtcgtggcacgtcgcgcgcgacggccatcggtgcaacgt
gcgcatgcgatcgaagtgctgcgtgcacgcgccgtcgatcttgtcgccgggcagagcgac
ctcatcatggccggccgcatcgacgcgcagcgtgctgcgctggccgacgccgatcggcgc
cttgccgcagccgacctcgcgttgaatcgcctagaagccaacgccggtgcagcgtatggc
atggccggcacgatcagtttggtagcggtgttgctggcggtcggcgtgctggtcggggag
ggccgaatcggcgcgccggctgctgcactcgcgctgttggtcgcgctcactgcggtcgag
cccttcgctgccatgcggcgcggcgcgctcgatgcaggacgcacctggctggcagtgcgg
cgactcgcgccgcgcatggcgctggacgatatgcagtcgaagccgttcacatccggctcg
atcgcaccatcggcgccatcggcaccgaccgcatcgagcgagtccgtcggcgctgccctg
tccaacgcccccgcctcgctgacgagcggcatcgcattgcgcttccacgaaatcaccgct
gcgccttccagggccggctcggacgtcttgcacggcgtgtcgctgcgcatcgacgtcggc
gagcgcgttgcgttgatcggccccagcggcgccggcaagtccacgctgctcgccatcgcg
gccggcgagttgacgccacgctccggcaccgccgtgatgctgcctgcctgcctgctcacg
caacgcaccgaactgttccaggacagcctgcgcgataacctgcgcctcgctgatccttca
gccgacgacgctcgcctctggcacgcgctcgaagcggcaggcctcgcacccgacattcgc
accgccgctgcaggcctggacatgcgactcggcgaaggcggcctcggcctgtcgggtggc
cagtcgcgccggctcgcgctcgcgcggctgttgctgcgccccacggacttctggctgctc
gacgagccgaccgaagcgctcgatacagagatcgcacgtgacgtgctgcagcgccttgcg
caacacgccggaccgcgcaccgtactcatcgccacgcacctgcgccgcgaggccgcgctg
gccgatcgactggtccgcatggaagccggccacatcgtcgccgacctgcgtcgcggcacc
cccggtttcgaagcggcgctgcgtgcgctgcgccccgattga
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