Variovorax sp. PAMC28562: H7F36_16885
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Entry
H7F36_16885 CDS
T10649
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02010
ABC transporters
vax02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H7F36_16885
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
H7F36_16885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_16885
Transporters [BR:
vax02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
H7F36_16885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DUF5790
SusE
Motif
Other DBs
NCBI-ProteinID:
QNK72841
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All DBs
Position
3595021..3595968
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AA seq
315 aa
AA seq
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MFKTKWIAGLALGALLAASGAHAQKKTVAVSIPAADHGWTAGVVYHAQAAAKEINKAFPG
IEVIVKTSPSASAQVSALEDLSAGRNLAALVILPFSSEELSGPVKSVKSKGAFVTVVDRG
LNDPSIQDLYVAGDNIAVGRNTAKFLVDKLGGKGNLVVLRGIPTVIDEERIKGFQDTIKG
TELKVLDIQYANWNSDQAFKLMQDYLAKYPKIDAVWANDDDMLLGVLEAIKQSGRKEIKY
ALGGNGMKEIIKKVMDGDAVTPVETPYPPSMIKTAIYLTVANLAAQAPVRGAVKLDAPLI
TKQNAKEYYFPDSPF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagacaaagtggatcgcaggactggcgctcggagcgctgctggccgccagtggg
gcgcacgcgcagaaaaagacagtggcagtgtcgatcccggcggcggaccatgggtggact
gccggtgtggtgtaccacgcgcaggccgcggccaaggaaatcaacaaggcctttcccggc
atcgaggtgatcgtgaagacctcgccctctgcatcggcccaggtcagcgcactggaggat
ctttcggctggacgtaatctggctgcgttggtgatcctgccattcagctcggaggagctg
tccggcccggtgaagtcggtcaagagcaagggagcctttgtcaccgttgtcgatcgtggt
ctcaacgacccttcgatccaggacctgtacgtggccggcgacaacatcgccgtagggcgc
aacacggcgaagttcctggtcgacaaattgggtggcaagggcaatctggtggtgttgcgc
ggcatcccgaccgtgatcgacgaagaacgcatcaaaggattccaggacaccatcaagggc
accgagttgaaggtgctggatattcagtatgccaactggaacagtgaccaggcattcaag
ctgatgcaggactacctggccaagtacccgaagatcgacgctgtctgggccaacgacgac
gacatgcttcttggtgtgctggaagccatcaaacagtccgggcgcaaggaaatcaagtac
gccctgggcggcaatggcatgaaggagattatcaagaaggtaatggacggtgacgccgtg
acgcctgtcgagacgccatatccaccttcgatgatcaagacggcgatctatctgacagtg
gcaaacctggcagcccaggcgcccgtgcgcggtgcagtcaagctggatgcgccgctcatc
accaagcaaaacgccaaggaatattactttccggactcgccgttctga
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