Variovorax sp. PAMC28562: H7F36_16900
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Entry
H7F36_16900 CDS
T10649
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
H7F36_16900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
DUF460
HHH_6
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QNK72843
UniProt:
A0A7G8VXK0
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Position
3597358..3599733
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AA seq
791 aa
AA seq
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MQKIIRQLAAEIKVGEHQIKAAIDLLDGGATVPFIARYRKEATDGLDDIQLRELEARLTY
LRELEDRRAAVLKSIDEQGKLTPELRAAIEFAPTKQELEDLYLPFKQKRRTKGQIAREFG
IEPLADLLLADPTRNPTTEALAFLKPATLLDDGKPGPDFSTVPAVLDGVRDILSERWAED
AVLVQRLREWLWSEGLFKSTLMSGKDEHNVDVSKFRDYFAYDEPIGRVPSHRALAVFRGR
TLEMLDAKLVLPVEPEPGKPSIAEGKIALHLGWSHSARPADDLLRKCVAWTWRVKLSLST
ERDLFTRLREDAEKIAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKL
VETATVFPHEPRKDWEGSLHTLGKLCAKHGVNLIAIGNGTASRETDKLAADLIKLLAKMA
AQVGAPEVAIDKVVVSEAGASVYSASELASQEMPDVDVSLRGAASIARRLQDPLAELVKI
DPKAIGVGQYQHDVNQSELARTLHAVVEDCVNSVGVDLNTASVPLLSRVSGLSGSVAKAV
VKWREANGAFATRKQLLEVTGFGPKAFEQSAGFLRVRGGSNPLDITGVHPETYPLVEQIM
VKTGLAVGELMGRADMLKTLKPELFANEKFGVITVKDILGELEKPGRDPRPDFKVARFND
GVEDIKDLVEGMILEGTVSNVAQFGAFIDIGVHQDGLVHVSQLANKFVEDAREIVKTGDI
VRVKVMEVDPVRKRIALSMRLDAAPARRDGPRDNRFEGAGRGQQQGSRKDNAPQPASQMA
SAFAKLQGLRK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcattcgccagctcgccgccgaaatcaaggtcggtgaacaccagataaag
gccgcgatcgacctgctcgatggcggagcgaccgtgccattcatcgcgcgctatcgcaaa
gaagccacggacggtctcgacgacatccagctgcgcgaactggaagcgcgcttgacttac
ctcagggagctggaagaccggcgcgccgcggtgctcaaaagcatcgacgagcaaggcaag
ctgacgcctgaactgcgcgctgccatagagttcgcgccgaccaagcaagagctggaagac
ctgtacctgccgttcaagcagaagcgccgcaccaaggggcagatcgcgcgcgaattcggc
atcgagccgctggccgacttgctgcttgccgaccccacgcggaacccgacgaccgaggcg
ctggcctttttgaagccggcgacgctgctcgacgacggcaagccagggccggatttttcc
accgtgccggcggtgctcgacggtgtgcgcgacatcctgtcggagcgttgggcagaagac
gcggtgctggtgcagcgcctgcgcgagtggctctggagcgaaggcctgttcaagtcgacg
ctgatgtcgggcaaggacgagcacaacgtcgatgtgtccaagtttcgcgattacttcgcc
tacgacgagccgatcggccgggtgccgtcgcaccgcgcgctggcggtgttccgcggccgc
acgctggagatgctcgatgccaagttggtgttgccggtcgagccggagccgggcaagccg
tcgatcgccgaagggaaaatcgcgctgcacctgggctggagccacagtgcgcggccggcc
gacgacttgctgcgcaagtgcgtagcctggacatggcgcgtcaagctgtcgctctccacc
gagcgcgacctgttcacccgcctgcgcgaagacgccgaaaagatcgcgatcaaagtcttc
gccgacaacctgcgcgacctgttgctggccgcgccggccggcccgcgcgtggtgatgggc
ctcgacccaggcattcgcacgggggtgaaggtcgcggtggtcgacgccaccggcaagctg
gtcgaaaccgcgaccgtgtttccgcacgaaccgcgcaaggattgggaaggctcgctccac
acgctcggcaagctgtgtgccaagcacggcgtgaatctgatcgcgatcggcaacggcacc
gccagccgcgaaaccgacaagctggccgccgacctcatcaagctgcttgccaagatggcc
gcacaggtcggtgcgccagaagtcgcgatcgacaaggtggtggtcagcgaggcgggggct
tcggtgtattccgcgagtgaactcgcgtcgcaggagatgcccgacgtcgacgtcagcctg
cgcggcgccgcgagcatcgcgcgacggcttcaggatccgttggccgagctggtcaagatc
gacccgaaggccatcggcgtcggccagtaccagcacgacgtgaaccagagcgaactcgcg
cgcaccctgcatgcggtcgtcgaggattgcgtgaactctgtcggtgtggacctcaacacc
gccagcgtaccgctgctgtcgcgtgtgtccggcctgtcgggcagcgtcgccaaggcggtg
gtgaagtggcgtgaggccaacggcgctttcgcgacccgcaagcagctgctcgaggtgacc
ggcttcggccccaaggctttcgagcagagtgccggcttcctgcgcgtgcgcggcggcagc
aacccgctggacatcaccggcgtgcacccggaaacctatccactggtcgagcagatcatg
gtgaagaccggcttggccgtaggcgagctgatgggccgtgccgacatgctgaagacgctc
aagccagaactcttcgccaatgagaagttcggcgtcatcaccgtcaaggacatcctgggc
gaacttgaaaagcccggccgcgacccgcgccctgacttcaaggtggcgcggttcaacgac
ggcgtcgaagacatcaaggacctggtcgaaggaatgatcctcgaaggcacggtgagcaac
gtcgcacagttcggtgccttcatcgacatcggcgtgcaccaggatgggctggtgcatgtg
agccagctggcgaacaagttcgtggaagacgcgcgtgagatcgtcaagaccggcgacatc
gtgcgggtcaaggtgatggaggtcgacccggtgcgcaagcgcatcgcgctgtcgatgcgg
ctggatgcggcgccggcgcggcgggatgggccgcgcgacaaccggttcgaaggagcgggt
cgcggccagcaacagggctcgcgaaaagacaatgcgcctcaaccggccagtcagatggcg
agcgcatttgcaaagctgcaagggctgcgaaaataa
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