Variovorax sp. PAMC28562: H7F36_17095
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Entry
H7F36_17095 CDS
T10649
Name
(GenBank) ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02010
ABC transporters
vax02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H7F36_17095
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
H7F36_17095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_17095
Transporters [BR:
vax02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
H7F36_17095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QNK72875
LinkDB
All DBs
Position
complement(3638777..3640429)
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AA seq
550 aa
AA seq
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MLASVWPPVPSDPSARTFMNDFLSSGTPTDAALSLAAPSSLKPSRRSFVLGALTVGAGSV
LPWDLANAQITDKSNLAIAYPVDVPTWDPGALSIPTIQAIYHTVFDSPLRYSQHLKLEAR
QIKQWRWLDDKATRLEITLRDDILFHDGSRMTMDDVKYSLSERPKADKKLLVGGMFNTLA
DVEVQSPTKGVLVYSRPTPAGPIYLGFLAMYIVPKAYMTQVGAEGFNAKPIGAGPYRMVE
HQRGSRIVLEAFDKYWGGAPAIKQVTFLIVPEPSARVALVESGRAAMAVQLPMREVQRLA
TKTGIVTKIYPFSEVYMLRIPNYVKPFEHDHVRNAMHLSIDKAALSKAFYGGVAKPLSVM
TPEGTPSFSDFQFPFNKAKAIEELKAAGYSTSNPVALTLLSTNGTFPNDFDMARAIAQMW
KAVGINATIEETTPAKLVEAAQNGKLTGVLLYSWANSTGDPENYAGRIFDPRLRFATWKD
MSLAPRIDGLMTEVDEVKRMAGYKALNAESSEKSWAIPLLQGVATVAYSSTLQPVLFDNG
YVLPVEYKYR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaagcgtttggccaccggttccttcagacccatcagcgagaactttcatgaac
gatttcttgagctcgggaaccccgacagacgcagcactgtctctggctgcaccgtcgtct
ttgaaaccatcgcgccgcagcttcgtgctgggcgcgctcaccgtgggggccggcagcgtg
ctgccgtgggacctggccaatgcacagatcaccgacaagtcgaacctggccatcgcgtac
cccgtcgacgtgccgacgtgggacccgggcgccttgtccatcccgacgatccaggcgatc
tatcacacggtgttcgattcgccgctgcgctactcgcaacatttgaagctcgaggcgcga
cagatcaagcaatggcgctggctcgacgacaaggcgacgcgactcgagatcacgttgcgc
gacgacatcctgttccacgacggctcgcgcatgacgatggacgacgtcaagtacagcctg
tcggaacggcccaaggcggacaagaagttgctggtcggtggcatgttcaacacgctggcc
gatgtggaagtgcagtcgcccaccaaaggcgttctggtctacagccggccaacgccggcg
gggccgatctacctgggcttcctggcgatgtacatcgtgcctaaggcctacatgacgcag
gtcggcgccgagggcttcaacgccaagccgatcggcgccggcccttaccgcatggtcgaa
catcagcgtggctcgcgtatcgtgctggaggctttcgacaaatactggggtggtgcgcct
gccatcaagcaggtcacctttttgatcgtgccggagccatcggctcgcgtggcattggtg
gagtcgggcagggcggcgatggcggtgcagttgccgatgcgcgaagtccagcgtctcgcc
accaagaccggcatcgtcacaaagatctatccgttctccgaggtctacatgcttcggatt
cccaactacgtgaagccgttcgaacacgaccatgtgcgcaacgcgatgcacctgtcgatc
gacaaggcggcgttgtcgaaggccttctacggcggggtcgccaagccgctgtcggtgatg
acgccggaaggcacgccgtcgttcagcgacttccagtttccattcaacaaggcgaaggcc
atcgaggagctgaaagctgccggctacagcaccagcaacccggtcgcgctgacgctgctc
agcaccaacggcaccttccccaacgacttcgacatggcccgcgccatcgcgcagatgtgg
aaggcagtcggcatcaacgcgacgatcgaagaaactacgccggccaagctcgtcgaagct
gcgcaaaacggcaaactgacgggcgtgctgctctacagctgggccaacagcacgggcgat
ccggagaactacgcgggccgaatcttcgacccgcgcctgcgcttcgcgacctggaaggac
atgtccctcgcgccacgcatcgacgggctgatgaccgaagtggacgaggtcaagcgcatg
gctggctacaaggcacttaacgcggagtcctcggagaaatcgtgggcgatcccgctgctg
caaggtgtggcgacggtcgcgtattcgtcgacgctgcagccggtgctgttcgacaacggc
tacgtgttgccggtcgaatacaaataccgctga
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