Variovorax sp. PAMC28562: H7F36_17180
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Entry
H7F36_17180 CDS
T10649
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02010
ABC transporters
vax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H7F36_17180
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F36_17180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_17180
Transporters [BR:
vax02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
H7F36_17180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
QNK72890
LinkDB
All DBs
Position
complement(3657936..3659105)
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AA seq
389 aa
AA seq
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MPSKPLKSHKSLTALAIFAAIATFAAPVLAQVKIGVVTSSTGPTALVGISQKNTVPLLPT
KIGDLTVEYISRDDASDSTNSVTEIKKLISESNIDALIGPSGSPNAMGVIQFIADAGVPM
LAPVGTAAVVLPMTEPKKWVFKTTQNDDIIAKALIGQMVKMKVKTLGVIALNDPYGENWV
KVVGELAAKNDIKIVATERFLRTDTSVTAQSLKVLAAAPDAVLIAAAGGPTVLPQTTLFD
QGYKGQIFQTHGAALPDFLRLGGKKVEGTILAASLMLVLPEIADSNPSKKMAIDYIAAYE
KLNGSKPATFGANVYDAGLLLQKAIPIAAQKAKPGTKEFRAALRDALEQTKELVATQGVY
TMTAADHSGFDDRGRELITVRDGNWKLLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaaacctctcaagtcacacaagtccctgacggcgctcgccatcttcgcggcc
atcgcaacgttcgcggcgcccgtgctggcgcaggtgaagatcggcgtcgtgacatcgtcg
accggaccgaccgccctggtcggtatttcgcaaaagaacacggtcccgctgctgccgacc
aagatcggtgacctgaccgtcgagtacatctcgcgcgacgacgccagcgactccaccaac
tcggtgaccgagatcaagaagctgatcagcgagtcgaacatcgacgcgctcatcggcccg
agcggctcgcccaacgcgatgggcgtgattcagttcatcgccgatgccggtgtgcccatg
ctggcgccggtcggtacagcggcggtggtgctgccgatgaccgagccgaagaagtgggtc
ttcaagaccacgcagaacgacgacatcatcgccaaggcgctgatcggccagatggtcaag
atgaaggtcaagacgctcggcgtcatcgcgctcaacgatccgtacggcgagaactgggtc
aaggtggtgggcgagcttgccgccaagaacgacatcaagatcgtcgcgaccgaacgcttc
ctgcgcaccgacacgtccgtcaccgcgcagagcctgaaggtgcttgccgctgccccggat
gcggtgctgatcgccgccgccggtggcccgaccgtgctgccgcagaccacgctgttcgac
cagggctacaagggccagatcttccagacgcacggcgctgcgctgcccgacttcttgcgc
ctcggcggcaagaaggtcgaaggcaccatcctggccgccagcctgatgctggtgctgccc
gagatcgccgacagcaacccgtccaagaagatggccatcgactacatcgcggcttacgaa
aagctcaacggcagcaagcccgccacctttggtgccaacgtgtacgacgccggcctgctg
ctgcaaaaggcgatacccatcgcggcgcagaaagccaagcccggcaccaaggagttccgt
gccgcactgcgcgacgcgctggagcagaccaaggagctggtcgcgacgcagggcgtctac
acgatgacggcggccgatcacagcggcttcgacgatcgcggccgtgagctgatcactgtc
agggatggcaactggaagctgctgaagtaa
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