Variovorax sp. PAMC28562: H7F36_18245
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Entry
H7F36_18245 CDS
T10649
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vax03019
]
H7F36_18245 (rng)
03009 Ribosome biogenesis [BR:
vax03009
]
H7F36_18245 (rng)
Messenger RNA biogenesis [BR:
vax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H7F36_18245 (rng)
Ribosome biogenesis [BR:
vax03009
]
Prokaryotic type
rRNA processing factors
H7F36_18245 (rng)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QNK73075
LinkDB
All DBs
Position
complement(3887962..3889488)
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AA seq
508 aa
AA seq
DB search
MQDILINWSPQETRVALVEHGAVQELHVERTLERGLVGNVYLGKVSRVLPGMQSAFIDIG
LERTAFLHVADIVSPFTPGSRASTQVPERDHRGSGPIVPIEKQVFEGQSLLVQVIKDPIG
TKGARLSTQISIAGRLLVFLPQDNHIGVSQKIPSDQRDALRARMQVLIEAAAAADSGGVV
PAATGGFILRTNGEDSSDAELAEDIAYLRKTWSRIRESSSRMPAMSLLHQDLSLLQRVLR
DMTSEDTQTIRIDSREQFDVLHKFGAEFMPQAAGKLQHYKGERPIFDLYAVDEEIAKALG
RRVELKSGGYLVVDQTEALTTVDVNTGGFVGARNFDDTIFKTNLEAAQAIARQLRLRNLG
GIIIVDFIDMVRDDHREQVLAEFRKQLMRDRVKTTAGGFSQLGLVEMTRKRTRESLAHML
CEPCLACKGQGIVKTARSVAYDVMREILREARQFTPREFRIVSSPQVIELFLDEESQHLA
GLSDFIGKPISLQAEAAIGQGQYDIVLL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacatcctgatcaactggtccccgcaagagacccgcgtcgcgctggtggagcac
ggcgcagtgcaagagctgcatgtcgaacgcacgctggagcgggggttggtcggcaacgtc
tatctcggcaaagtgtcgcgcgtgctgcctggcatgcagtcggcttttatcgacatcggt
ctcgagcgcacagcgttccttcacgtcgccgacatcgtttctcccttcacgccgggctca
cgtgccagcacgcaggtgcccgagcgcgaccatcgcggcagcgggccgatcgtgcccatc
gaaaagcaggtgttcgaaggacagtcgttgctcgttcaggtgatcaaggacccgatcggc
accaagggcgcgcgcctgtcgacgcagatcagcatcgcagggcggctgctggtgttcttg
ccgcaagacaaccatatcggcgtgtcgcagaagattccgtcggaccagcgggatgccttg
cgcgcccgcatgcaggtgctgatcgaggcggcagcagcagccgacagcggcggtgtggtg
ccggccgccaccggtggcttcatcctgcgtaccaacggcgaagactcgtccgacgccgaa
ctcgccgaagacatcgcgtacctgcgcaagacttggtcgcgcattcgcgaatcgtcttct
cgcatgccggcgatgtcgttgctgcatcaagacctgagcctgctgcaacgcgtgttgcgc
gacatgaccagcgaagacacgcagaccattcgcatcgattcgcgcgagcagttcgatgtg
ctgcacaagttcggtgccgagttcatgccacaggcggctggcaagctgcagcactacaaa
ggcgagcgtccgattttcgacctgtatgcggtcgatgaagagatcgccaaggcgctaggt
cgacgcgtcgaactcaagtcaggtggttatctggtggtcgatcagaccgaggcgttgacc
accgtcgacgtcaacaccggtggtttcgtcggcgcgcgaaatttcgacgacacgatcttc
aagaccaacctcgaagccgcgcaggccatcgcgcgacaactcaggttgcgcaatctgggc
ggcatcatcatcgtggacttcatcgacatggtgcgagacgaccatcgcgagcaggtgctg
gcggagttcaggaagcaactcatgcgcgatcgcgtcaagacgacagccggcggtttctcg
cagttgggtctggtcgagatgacgcgcaagcgcacccgcgaatcgctggctcacatgctg
tgcgagccgtgcctggcgtgcaaaggtcagggcatcgtcaagacggcccgcagcgtggcc
tacgacgtcatgcgagagatcctgcgcgaggcgcggcagttcacgccgcgcgagttccgg
atcgtgtcatcgccgcaggtcatcgagctgtttctggacgaagagagccagcatctcgcc
ggcctcagcgacttcatcggaaagccgatttccctgcaggccgaagctgcgatcggccag
ggacagtacgacatcgtgttgctctag
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