KEGG   Variovorax sp. PAMC28562: H7F36_18245
Entry
H7F36_18245       CDS       T10649                                 
Symbol
rng
Name
(GenBank) ribonuclease G
  KO
K08301  ribonuclease G [EC:3.1.26.-]
Organism
vax  Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:vax00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vax03019]
    H7F36_18245 (rng)
   03009 Ribosome biogenesis [BR:vax03009]
    H7F36_18245 (rng)
Messenger RNA biogenesis [BR:vax03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H7F36_18245 (rng)
Ribosome biogenesis [BR:vax03009]
 Prokaryotic type
  rRNA processing factors
   H7F36_18245 (rng)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio
Other DBs
NCBI-ProteinID: QNK73075
LinkDB
Position
complement(3887962..3889488)
AA seq 508 aa
MQDILINWSPQETRVALVEHGAVQELHVERTLERGLVGNVYLGKVSRVLPGMQSAFIDIG
LERTAFLHVADIVSPFTPGSRASTQVPERDHRGSGPIVPIEKQVFEGQSLLVQVIKDPIG
TKGARLSTQISIAGRLLVFLPQDNHIGVSQKIPSDQRDALRARMQVLIEAAAAADSGGVV
PAATGGFILRTNGEDSSDAELAEDIAYLRKTWSRIRESSSRMPAMSLLHQDLSLLQRVLR
DMTSEDTQTIRIDSREQFDVLHKFGAEFMPQAAGKLQHYKGERPIFDLYAVDEEIAKALG
RRVELKSGGYLVVDQTEALTTVDVNTGGFVGARNFDDTIFKTNLEAAQAIARQLRLRNLG
GIIIVDFIDMVRDDHREQVLAEFRKQLMRDRVKTTAGGFSQLGLVEMTRKRTRESLAHML
CEPCLACKGQGIVKTARSVAYDVMREILREARQFTPREFRIVSSPQVIELFLDEESQHLA
GLSDFIGKPISLQAEAAIGQGQYDIVLL
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgcaagacatcctgatcaactggtccccgcaagagacccgcgtcgcgctggtggagcac
ggcgcagtgcaagagctgcatgtcgaacgcacgctggagcgggggttggtcggcaacgtc
tatctcggcaaagtgtcgcgcgtgctgcctggcatgcagtcggcttttatcgacatcggt
ctcgagcgcacagcgttccttcacgtcgccgacatcgtttctcccttcacgccgggctca
cgtgccagcacgcaggtgcccgagcgcgaccatcgcggcagcgggccgatcgtgcccatc
gaaaagcaggtgttcgaaggacagtcgttgctcgttcaggtgatcaaggacccgatcggc
accaagggcgcgcgcctgtcgacgcagatcagcatcgcagggcggctgctggtgttcttg
ccgcaagacaaccatatcggcgtgtcgcagaagattccgtcggaccagcgggatgccttg
cgcgcccgcatgcaggtgctgatcgaggcggcagcagcagccgacagcggcggtgtggtg
ccggccgccaccggtggcttcatcctgcgtaccaacggcgaagactcgtccgacgccgaa
ctcgccgaagacatcgcgtacctgcgcaagacttggtcgcgcattcgcgaatcgtcttct
cgcatgccggcgatgtcgttgctgcatcaagacctgagcctgctgcaacgcgtgttgcgc
gacatgaccagcgaagacacgcagaccattcgcatcgattcgcgcgagcagttcgatgtg
ctgcacaagttcggtgccgagttcatgccacaggcggctggcaagctgcagcactacaaa
ggcgagcgtccgattttcgacctgtatgcggtcgatgaagagatcgccaaggcgctaggt
cgacgcgtcgaactcaagtcaggtggttatctggtggtcgatcagaccgaggcgttgacc
accgtcgacgtcaacaccggtggtttcgtcggcgcgcgaaatttcgacgacacgatcttc
aagaccaacctcgaagccgcgcaggccatcgcgcgacaactcaggttgcgcaatctgggc
ggcatcatcatcgtggacttcatcgacatggtgcgagacgaccatcgcgagcaggtgctg
gcggagttcaggaagcaactcatgcgcgatcgcgtcaagacgacagccggcggtttctcg
cagttgggtctggtcgagatgacgcgcaagcgcacccgcgaatcgctggctcacatgctg
tgcgagccgtgcctggcgtgcaaaggtcagggcatcgtcaagacggcccgcagcgtggcc
tacgacgtcatgcgagagatcctgcgcgaggcgcggcagttcacgccgcgcgagttccgg
atcgtgtcatcgccgcaggtcatcgagctgtttctggacgaagagagccagcatctcgcc
ggcctcagcgacttcatcggaaagccgatttccctgcaggccgaagctgcgatcggccag
ggacagtacgacatcgtgttgctctag

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