Variovorax sp. PAMC28562: H7F36_18400
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Entry
H7F36_18400 CDS
T10649
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vax03400
]
H7F36_18400
DNA repair and recombination proteins [BR:
vax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H7F36_18400
Archaeal homologous recombinant proteins
H7F36_18400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
cobW
AAA_22
RsgA_GTPase
nSTAND3
AAA_21
NTPase_1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QNK73096
LinkDB
All DBs
Position
complement(3917853..3921320)
Genome browser
AA seq
1155 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWAIDFTKSPFTDNSLFAITGPTGAGKSTLLDAICLALYHETPR
LKSISASANDIMTRHTADCLAEVEFEVKGAVYRAFWSQRRARDKIDGALQAPKVELASVD
RTSGAGTILTSQSNDKLKRMAEITGLDFPRFTKSMLLAQGGFAAFLNASANDRAELLEEL
TGTEIYGEISKKVFDEARHAKQQLEQLKARADGVELLTADKREAMQGDVKRWGDELLGVQ
AAQQVAQTQRQWQMNLAQSVQDVQTTDAQGTAAAAARETAAPELRRLADSEPAQALKPMH
LAWQQAQAACGHSETVLATLRVDRQRETTAHYRQHHLAQTLASRIAQHAQDQLTLTKGEH
QQLTDFCAAHPQRAALGERLGSWRQQLEQRHRLQQSLATQRQALQVLQEEQAARSRKLTA
QSALVDTALLAKTASASAQQSAQAAQDQRLAGQTPVGLRSLWQAEQGQLNRWQQLEALAT
QRRELATQQGTLAADVQQGNATIGTQTAAVSALREEYKTVKEQVADKQKLLDQERRIQSL
DAHRLALQPGEACPLCGAVEHPAIDAYQALDVSATAATLKLKQDALEKLKTQGEIAAAAL
AASNARQTERLHSQEKAAQHISQWQTDWAASISQVKTTPALTGDDWHSAEHLAGGHQAVA
QALVQLTNDLQAADMGEQTIQRAQAAANQSAQALQAAQGQLALLQQAAEESQLRQAALMQ
TGRTHQEELATLEASLQATLAEAGYALPVDPKPWLQERDGEWQHWQQTQRQLQALAQAII
RQQAQCDATQAEANLWAQRWTDLQAHADEPALALPAHKEVAADELPAALAACTHDIAILT
QTIAALAGRYAQAEAALAQQRTGLLDAEGAWHTALNASPFADAVAFEVALLSEPERQRLS
ALKDSLNAAQQRASALLQAAREKQAGLEAQAMTPLAAEEIVAQLETLESQRSTLSEQMGA
QRALLSSDAQHRQNQQALFAQISAQTAEADIWQRLDGLIGSAKGDKFRKFAQGLTLDHLL
HLANRHLARLHGRYLLRLKSTGELELDIVDAWQGDVTRDTRTLSGGEGFLVSLALALALS
DLVSHKTSIDSLFLDEGFGSLDGDTLEIALTALDSLNASGKMIGIISHVEALKERIPAQI
RVEKGGGIGHSRLMV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagtctgcgcctgaagaacctcaactcactcaaaggtgagtgggcgatc
gacttcaccaaatccccctttaccgacaacagcctgtttgccatcaccgggcccaccggc
gcgggcaagtcgactttgctcgacgcgatctgtctggcgctgtaccacgagacgccgcgc
ctgaagagcatctccgcgtcggccaacgacatcatgacgcgccacaccgccgattgcctg
gccgaggtggagtttgaagtgaagggcgctgtgtaccgcgccttctggagccagcgccgc
gcccgcgacaaaatcgatggtgcgttgcaggctcccaaggtggaactggccagcgtcgac
cggaccagcggcgcagggacgatccttaccagccaaagcaatgacaagctcaaacgcatg
gccgagatcaccggcctcgacttcccccgtttcaccaagtccatgctgctggcccaaggc
ggctttgctgcattcttgaacgccagcgccaacgaccgggccgagttgctggaggagctg
acgggcaccgaaatctacggcgagatctccaagaaagtgttcgacgaagcgcggcatgcc
aagcagcaactggagcaactcaaagcccgcgcagacggcgtggaactgttgaccgcagac
aagcgtgaggccatgcaaggcgatgtgaagcgctggggcgacgagctgcttggcgtgcaa
gcagcccagcaggtcgcccaaacgcaacgccaatggcaaatgaacctggcgcaaagtgtg
caagacgtgcagaccacggacgcgcaaggcactgcagcggcagccgcgcgggaaaccgcc
gcacccgaacttcgccgccttgccgacagcgaaccagcgcaagcgctcaagccgatgcac
ctcgcttggcaacaagcgcaagccgcttgcggccatagcgaaaccgtgctggcaacgctc
cgcgtcgatcggcaacgcgagaccactgctcactaccggcagcaccaccttgcccaaacg
ctggccagccgaatcgcgcagcatgcgcaagaccaactgacgctgacgaagggcgagcac
cagcagctcaccgacttttgcgccgcccacccacaacgcgccgccttgggcgagcgcctg
ggcagctggcggcagcagttagaacagcgccatcggctgcaacaaagtcttgccacacag
cgacaggctctgcaggtgctgcaagaagagcaagcggcccgcagccgcaagctcacggca
cagagcgccctggtggatacagcgctgctggcaaaaaccgcatcggcgtccgcgcagcag
tcggcgcaggccgcacaggaccagcgattggccgggcagacgcccgtgggtttgcgttca
ctgtggcaggccgagcagggccaactgaaccgctggcaacagctggaagctctggcaaca
cagcgtcgtgaactcgcgacccagcagggcacgctggcggcggacgtgcagcaaggcaac
gccacgatagggacgcaaactgctgcggtgtcagcgctgcgggaagaatacaaaacggtg
aaagagcaggttgcagacaagcaaaaactgctcgaccaggagcgccgcattcaaagcctg
gatgcgcaccgcctggcattgcagcccggggaggcttgccccttgtgcggtgccgtggaa
caccccgcaatcgatgcttaccaggcgctcgatgtttcagccaccgccgccaccttgaag
ctcaaacaagatgcgctcgagaaactgaaaacacagggggaaatcgccgccgccgctttg
gctgcgagcaacgcacgccaaacggagcggctgcacagtcaagagaaagccgcccagcac
atcagccagtggcaaaccgattgggccgcgtccatcagccaggtgaaaaccacgcccgca
ctgaccggagacgattggcacagcgccgagcacttggccggcgggcatcaggccgttgcg
caggcactcgtccaactcaccaacgacctgcaagccgccgacatgggcgaacagacgatt
cagcgcgcgcaggcagccgccaaccaaagcgctcaggcgttgcaggcggcacagggccag
ttggccctgctgcaacaggcggccgaggagtcgcagttgcgccaggccgcactgatgcaa
accggccgaacacatcaggaagagctcgcgaccctggaggcgagcctgcaagccacactg
gccgaggccggctacgcgctgccagtcgatccgaagccgtggctacaagagcgagacggt
gagtggcagcactggcagcaaacccagcgccaacttcaggcgctggcccaagccatcatc
cgccagcaagcccagtgcgacgcgacacaggcagaagccaacctgtgggcgcaacgatgg
accgacctgcaggcccacgcggatgaacccgcgttggcattgcccgcgcacaaggaagtg
gcggccgatgaactgccggccgcgctcgccgcttgcactcacgacatcgccatcctgacc
caaaccatcgccgccctggcgggccgatacgcgcaggcagaggctgccctcgcgcagcag
cgcactggcttgctggatgccgaaggcgcgtggcacaccgccctgaacgccagccctttc
gccgacgcggtagcgttcgaggtcgcacttttgtcggagcccgaacgccagcgcttgagt
gcgctgaaagattcactgaacgctgcgcaacagcgggccagcgcactgctgcaggccgca
cgcgagaaacaagcggggttggaggcacaagcaatgacgccactcgccgccgaagaaatc
gttgcgcaactggagacgctggagtcgcagcgcagcaccctcagtgagcaaatgggcgcg
cagcgcgcattgctttcgagcgatgcgcagcaccgccaaaaccagcaagccctgtttgcg
caaatcagcgcgcaaaccgcagaggccgatatctggcaacggctggatggattgatcggc
tctgccaaaggcgacaagttccgcaagtttgcccaggggctcacgctcgaccatttgctg
caccttgccaaccggcacttggcgcgcctgcatggccgctacctgctgcgcctcaagtcc
accggggaactggagctggacatcgtggatgcgtggcagggcgacgtcacgcgcgacacg
cgcaccctgtcgggcggcgaaggcttcctggtcagcctcgcgctggccctggcgctgtcg
gacctggtgagccacaaaacgtccatcgattcgctgttcctcgacgaaggctttggctcg
ctcgacggcgacacgctggagatcgctctgacggcgctggattcactgaacgccagcggc
aagatgatcggaatcatcagccacgtggaggcgctgaaagagcgaatccccgcgcagatc
cgggtggagaagggcggggggattgggcattcgagattgatggtgtag
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