Variovorax sp. PAMC28562: H7F36_18740
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Entry
H7F36_18740 CDS
T10649
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vax03029
]
H7F36_18740 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_18740 (bamA)
Mitochondrial biogenesis [BR:
vax03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
H7F36_18740 (bamA)
Transporters [BR:
vax02000
]
Other transporters
Pores ion channels [TC:
1
]
H7F36_18740 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
QNK76049
UniProt:
A0A7G8W6Q6
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All DBs
Position
complement(3987352..3989790)
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AA seq
812 aa
AA seq
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MNKHFSRFRLRSVAAVVAGALAATAAWAVEPFTVRDIRVEGLQRVEPGTIFASLPLRVGD
TYSDDRGSAAIRALFDLGLFKDVRIDVSGNVLVVIVEERPTIADVDFAGTKEFDKAVLQK
ALREVGLAEGRPYDKALADKAEQELKRQYISKSLYNATVVTTVTPTERNRVNLTFTVNEG
DSARIREIRVVGNKAFSESTLLDLFDQDSGGFMSWYTKSNQYSRAKLNADLETLRSYYLT
RGYLEFRIDSTQVAISPDRQDLSVTVNVTEGEKFVVAGVKLAGNYLGRDEEFKSLVTIKP
GEAYNGEDVTATTKAFTDYFGTFGYAFARVQAQPEVDRVNNRVNLTLQAEPSRRVYVRRV
NIGGNNRTRDEVVRREFRQYEASWYDGDKIKLSRDRVDRLGFFTEVNVDTVEIPGTPDQV
DLTVSVVEKPTGTLQLGAGFSSAEKVSLTFGITQENVFGSGNYLGLQVNTSKYNRTVSIT
ATDPYFTADGISRTFSLYSATTRPYYAADGDYKLVHEGGSISFGVPFSEVDTVFFGIGLE
RYRFDPGSNGTYTLVNGQYVYSASPQAYRDYFKCATGAAGIVTSCTNSSVFGIPLTIGWS
RDDRDSALVPTRGRLQRANLEVGVGGDMKYLKSSYQYQQFFPITKQYTFSVNGELGYARP
YGDKAYPIFKNFYAGGLGSVRGFEQNSLGPRDFVTGASLGGTKKAIFNAELSTPFPGAGN
DRTLRLYSFFDAGNVFASRASGITDAQWKAQQKIRASVGLGISWVSPLGPLRLAYAFPIR
QQKQVVDPNNALIELVPADRVQRLQFQIGTSF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacacttcagtcgctttcgcttgcgtagcgtggcagcggtagtcgccggtgca
ctggctgcaacagccgcatgggctgtcgagccattcacggttcgcgacatccgggtcgaa
ggcctgcaacgcgtggagcctggaacgatcttcgcgtcgttgccgctccgtgtcggcgac
acctacagcgacgatcgtggctctgctgcgattcgagcactgttcgatctggggctgttc
aaggacgttcgaatcgacgtgagcggcaacgtgctggtagtcatcgtcgaagagcgtccg
acgattgccgatgtcgatttcgccggcaccaaggagttcgacaaagccgttctgcaaaag
gcgctgcgcgaagtcgggctggccgaagggcgcccctacgacaaagcactggccgacaag
gccgagcaagaactcaagcgccagtacatcagcaagagcctgtacaacgccaccgtcgtg
accaccgtgacgccgacggaacgtaatcgcgtcaacctgaccttcacggtgaacgaaggc
gattccgcccgcatccgcgaaatccgggtcgtcggcaacaaggcctttagcgagtcgacc
ttgctcgacttgttcgatcaggacagcggcggcttcatgagctggtacaccaagtccaac
cagtattcgcgcgccaagctcaatgccgacctcgagacgctgcgctcgtactatctcacg
cgcggctacctcgagttccgcatcgactcgacccaggtcgccatttcgcccgaccggcag
gatctgtcggtcaccgtcaacgtgacagaaggcgagaagtttgtcgtggctggcgtcaag
ctcgcgggtaactatcttggccgtgatgaagagttcaagtcgctcgtcaccatcaagccg
ggcgaggcctacaacggcgaagacgtcacggctaccaccaaggctttcacagactatttc
ggtaccttcggctatgcctttgcacgcgtgcaggcacagcccgaagtcgaccgcgtcaac
aaccgcgtcaacctgacgctgcaggccgaaccttcgcgtcgcgtgtatgttcgccgcgtg
aacatcggcggcaacaatcgcacgcgtgacgaagtcgtccgtcgcgagttccgtcaatac
gaggcgtcgtggtacgacggcgacaagatcaagctgtcgcgcgatcgcgtggaccgtctc
ggctttttcaccgaggttaatgtcgacacggtcgaaatccccggcacacccgatcaggtc
gacctgacggtgagcgttgttgaaaaaccgacgggtacgctgcaactgggtgccgggttc
tctagcgcagagaaggtgtccctcacgttcggcatcacgcaagaaaatgttttcggttcg
ggcaactacttaggcttgcaggtcaacaccagtaagtacaaccgcacggtatccatcacg
gcgaccgacccgtacttcacggcagacggcatctctcggaccttcagcctgtattccgcc
acgacgcgtccctactatgcggcggacggtgactacaaactcgtgcacgaaggaggctcg
atcagttttggcgtgccgttcagtgaagtcgacacggtgttcttcggcatcgggctcgag
cgctatcgtttcgatccgggctcgaacggcacctacaccctggtcaacgggcagtatgtg
tacagcgcatcgccgcaggcgtaccgcgactacttcaaatgcgccacgggcgctgctggc
atcgtcacgagttgcaccaattcatccgtgttcggcatccctttgaccatcggctggtcg
cgtgatgatcgcgacagtgctctggttccgacccgtggtcgcctgcaacgcgccaacctg
gaagtcggcgttggcggcgacatgaagtacctcaaatcgagctaccagtaccagcagttt
ttcccgatcaccaagcagtacaccttctcggtcaacggagaactgggctacgcccggcct
tatggcgacaaggcgtacccgatcttcaagaatttctatgccggtggcctgggttcggtg
cgaggcttcgagcaaaactctttgggcccgcgcgacttcgttacgggcgcttcgctcggc
ggcacgaaaaaggcaatcttcaacgccgagttgagcacgccgttccccggcgcaggcaac
gaccggacgctgcgtctgtactcgttcttcgacgccggcaatgtgttcgccagtcgcgct
tccggcattaccgatgcgcaatggaaagcccagcaaaagatccgcgcctcggttggtttg
ggcatcagttgggtttcgccgctcggaccgctgcgtcttgcctatgcgttcccgattcgt
cagcagaagcaggtcgttgatccgaataatgcgctgatcgaattggtgcctgccgatcgc
gttcaacgcctgcaatttcagattggaacttcgttctga
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