Variovorax sp. PAMC28562: H7F36_19235
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Entry
H7F36_19235 CDS
T10649
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
H7F36_19235
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Biotin_lipoyl
BSH_CusB
CzcB_C
BSH_YknX
BSH_YhbJ
RND-MFP_C
BSH_CzcB
BSH_RND
FTR1_4HB
Semialdhyde_dhC
BSH_LcnD
YqfD
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
QNK76057
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Position
complement(4103336..4104562)
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AA seq
408 aa
AA seq
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MGALVVALLAALAVWQGPGLIFGPRIAVDTVVQRDFVRTVVASGHVETPHRVSLGTQIVG
TVARVPVSEGQSVRAGQILIELEAKESNAALAQADAAVLQAQARLRQLREVQAPMAQQAL
RQAQVNVDNARAQWLRSKELSAMGFVGQAALDDAAKVVAVGESQLDSVRSQLAGTRPGGS
DEAVATTALDQARAGAAAARSRLLYATVLAPVAGTLIDRAVEPGDVVQPGKALMVLSPEG
STQLVVQIDEKNLQMLAVGEAAQASADAYPDQRFDAELAYINPGVDVQRGSVEVKFDVAR
PPAYLRQDMTVSVDIHVASRKQAVLVSSDAVHDADLAQPWVLKVDGRRVRRQAVTLGLRS
GGVSEVLQGLHAGDRVVPVGAVGISDGSRLRTTAPAKQAPPASSASPT
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctctggtggttgcactcctcgcagcccttgcggtctggcaggggccggggctg
atcttcggaccgcgcattgcggtcgacacggtggtgcagcgcgacttcgtacgcacggtc
gtggcgagcgggcatgtcgagacaccgcaccgcgtgagtctcggcacgcagatcgtgggt
accgtcgcccgcgtgccggtcagcgaaggtcagtccgtgcgtgcagggcagatcctgatc
gagctggaggcgaaagaatcgaatgcggcattggcgcaggccgatgcggccgtgctgcaa
gcccaggcgcgactgcgacagctgcgcgaggtgcaggcgccgatggcacagcaggcgctg
cggcaggcgcaagtgaatgtcgacaacgcgcgtgcgcagtggcttcgaagcaaggagctt
tccgcgatgggcttcgttggccaggcggcgctcgacgacgcagccaaggtcgttgccgtc
ggcgagtcgcaactcgattcggtacggagtcagcttgccggcacgcgacccggcggcagc
gacgaagcggtggcgacgacggcgctcgatcaggcgcgcgcgggtgcggcggctgcacgt
tcgcgactgctgtatgcgaccgtgctggctccggttgcaggcacgcttatcgaccgcgcc
gtcgagccgggtgacgtggtgcagccaggcaaggccctgatggtgctgtcgcctgaggga
agcacccagctcgtggtgcagatcgacgaaaagaatcttcagatgctggcggtcggcgag
gcggcgcaggcctcggccgatgcctacccggaccagcgcttcgacgctgaactggcctac
atcaatcccggtgtcgatgtgcagcgcggctcggtcgaggtgaagttcgacgtggcgcgg
ccaccagcgtatctccggcaggacatgaccgtgtcggtcgacattcacgtagcttcgcgc
aagcaggcggtgctggtgtcgtcggacgcggtgcacgatgccgatctggcgcagccttgg
gtgctgaaagtcgatgggcgcagggtgcgccggcaggcggttacgctggggttgcgcagc
ggtggtgtcagtgaagtgctgcaagggctgcatgccggcgaccgcgtggtgccggtcggc
gctgtcggcatttcggacggctcgcgactgcggaccaccgcaccggcgaaacaggcgcct
cccgcatcctccgcatctccgacatga
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