Variovorax sp. PAMC28562: H7F36_19415
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Entry
H7F36_19415 CDS
T10649
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
vax Variovorax sp. PAMC28562
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_19415
01504 Antimicrobial resistance genes [BR:
vax01504
]
H7F36_19415
Transporters [BR:
vax02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
H7F36_19415
Antimicrobial resistance genes [BR:
vax01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
H7F36_19415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
Beta-prism_lec
Motif
Other DBs
NCBI-ProteinID:
QNK73258
LinkDB
All DBs
Position
complement(4144890..4148063)
Genome browser
AA seq
1057 aa
AA seq
DB search
MTSPVDAKPAGFNLSKWALDHGALTRYLMLVLMVLGFTSYFQLGQDEDPPFTFRVMVVQT
FWPGATAQQVAEQVTDKIERTLQEVPYADKIRSYSKPGESQIIFEIKDSSKASEVPNVWY
TVRKKIADMRGNLPGGIQGPFFNDEFGDVFGVIYALESEGFSQSELKTFADDVRQRLLRV
KDVSKVQQFGLQDEKVFIEVSQKRVAQLGLDFNAVLAQIGSQNAVEPAGTIQSPLDVVQV
RVAGQFTSVEQLRDMPIRGSSGNQLRLGDIADIHRGYVDPPTVKVHYQGKEVVALGISMA
KGGDIIALGKALKVATKEIDRQLPAGVKLAQIQDQPVAVADSVSEFIDVLVEAVAIVLAV
SFIALGLHKGGRFGWYVDIRPGLVVAITIPLVLALTFLAMNYFGIGLHKISLGSLIIALG
LLVDDAIIAVEMMVRKMEEGYDKVRAATYAYDVTAKPMLTGTLITAAGFLPIGIAKSVTG
EYTFAIFAVTVIALLLSWIVSVYFVPYLGTVLLKVKPHDPDAPPHELFDSPFYNTFRRTV
NWCVEYRWITIGATVAIFALGIVGMGKVQQQFFPDSSRPEILVELWSPEGTSFAASEAIA
RRAEKRFMQESGVATVATWIGTGVPRFYLPLDQVFPQTNVSQMIVLTKDLHQRELLRVKL
PAILAQEFPEVRGRVKLLPNGPPVAYPVQFRVIGTDPAALRIKADEVKAVMRDNANMRGV
NDNWNESVKVIRLEIDQSKARALGVTSQAIAQASKTMFSGTNVGQYRENDRLIDIVLRQS
PDERQAISDIGNAYIPTTSGHSIPLTQIARPVFTWEPGVIWRQNRDYTITVQGDIVEGLQ
GATVTSQLLPKLREIEAKWRADGQGAYRIEVAGAVEESSKGSSSIVVGVPIMLFLVFTLL
MLQLHSFSRSLLVFITGPLGIAGVSAALLLLNRPFGFVALLGVIALMGMIQRNSVILIDQ
IESDRSAGVPAWDAIVESAVRRLRPIVLTAAAAVLAMIPLSRSVFWGPMAVAIMGGLIVA
TVLTLLALPAMYAAAFRVKREPVEGSQEVLKHVPVSA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgccggtcgacgccaagcccgccgggttcaatctctccaaatgggcgctcgac
cacggggcgctcacacgctacctgatgctggtgctcatggtgctggggttcacttcgtac
tttcagctcgggcaggacgaagacccgccgttcaccttccgggtgatggtcgtgcagacg
ttctggcccggggccacggcgcagcaggtggccgagcaggtcaccgacaagatcgagcgc
acgctgcaagaggtgccgtacgccgacaagatccgcagttactcgaagcctggtgagtcg
cagatcattttcgagatcaaggactcgtccaaggccagcgaggtacccaacgtctggtac
acggtgcgcaagaagatcgccgacatgcgaggaaacttgcccggcggcatccagggtccg
ttcttcaacgacgaattcggtgatgtcttcggcgtgatctacgcgctcgagagcgaaggc
ttcagccagtccgagctcaagacctttgccgacgatgtgcgccagcgcctcttgcgcgtc
aaagacgtttccaaggtgcagcaattcggtctgcaggacgaaaaagtcttcatcgaggtt
tcgcagaagcgcgtggcgcaactggggctcgacttcaacgcggtgctggcgcagatcggc
tcgcagaacgcagtcgagcccgccggcacgatccagtcgccgctggacgtggtgcaggtg
cgcgtggcagggcagttcaccagcgtcgaacagttgcgcgacatgcccattcgcggcagt
tcgggcaaccagctgcgcctcggcgacatcgccgacattcaccgtggctacgtcgatccg
ccgaccgtcaaggtgcattaccagggcaaggaagtcgtggcactcggcatttcgatggcc
aagggcggcgacatcatcgcgctgggcaaggcgctgaaggtcgcgaccaaagagatcgac
aggcagttgccagccggcgtcaagctggcgcagatccaggaccagccggtggcggtggcc
gactccgtcagcgagttcatcgacgtcctggtcgaggccgtggccatcgtgctggcagtg
agcttcattgcgctcgggcttcacaagggtgggcgcttcggctggtatgtcgacatccgg
ccggggctggtggtggcgatcaccattccgctggtgctggcgctgactttcctggcgatg
aactacttcggcatcgggttgcacaagatttcgctcggctcgctgatcatcgcgctcggc
ctcttggtcgacgacgcgatcatcgcggtcgagatgatggtgcggaagatggaggagggc
tacgacaaggtgcgtgccgcgacctacgcctacgacgtgaccgccaagccgatgctgact
ggcaccttgattaccgcggctggcttcctgcccatcggcatcgccaagtctgtgacgggc
gagtacaccttcgcgatcttcgcggtgaccgtgatcgcactgctgttgagctggatcgtg
tcggtgtatttcgtgccgtatctcggcacggtgctgctcaaggtgaagccgcacgacccc
gacgcgccaccgcacgagctgttcgactcgcccttctacaacacgttccgccgcacggtg
aactggtgcgtggagtaccgctggatcaccatcggtgcgactgttgcgatctttgcgttg
ggcatcgtcggcatgggcaaggtccagcagcagttctttcccgattcgagtcgacctgaa
atcctggttgaactgtggtcgcccgaaggcacttcgttcgcagcgtctgaagccattgcc
cgacgtgccgagaaacggttcatgcaggagtccggcgtggccacggtggcgacctggatc
ggcaccggcgtgcctcgcttctatctgccactcgaccaggtgttcccgcaaaccaacgtg
tcgcagatgatcgtgctgacgaaagatctgcatcagcgagagttgcttcgcgtgaaactg
ccggccatcctggcacaggaattccccgaggtgcggggccgcgtcaagctgctgcccaat
ggcccgcctgtcgcatacccggtgcagtttcgcgtgatcggcacggatccggcggcgctg
cgcatcaaggccgacgaggtcaaggccgtgatgcgcgacaacgccaacatgcgcggcgtc
aacgacaactggaacgagtcggtcaaggtgatccggctcgagatcgatcagtcgaaggca
cgcgccttgggcgtgacgagccaggcgatcgcgcaagcgtccaagacgatgttcagcggc
accaacgtgggccagtaccgcgagaacgaccggctcatcgacattgtcttgcgccagtca
ccggacgagcgccaggcgatctcggacatcggcaacgcctacatcccgacgacatccggc
cattcgattccgttgacgcagatcgcccgaccggtattcacatgggagccgggcgtgatc
tggcgccagaaccgcgactacacgatcaccgtgcagggcgacatcgtcgaggggctgcaa
ggcgcgaccgtgaccagccagttgctgccgaagctccgcgagatcgaggcgaagtggcgg
gccgacgggcagggcgcctatcgcatcgaagtggcgggcgccgtggaggagagcagcaag
ggttcgtcgtcgatcgtggtcggcgtgccgatcatgttgttcctggtgttcacgttgctg
atgctgcagttgcacagcttcagccggtcgttgctggtgttcattaccgggccgctgggt
atcgcgggtgtgtcggcggcattgctgctgctgaaccggccgttcggctttgtcgcgctg
ctcggcgtgatcgcgttgatgggcatgatccagcgcaactcggtgatcctgatcgaccag
atagagagcgaccggtcggcgggcgtacctgcctgggatgccatcgtcgaatcggctgtg
cggcggctgcggccgatcgtgctgaccgcggcggctgcggtgctggcgatgattccgctg
tcgcgcagtgtcttctgggggccgatggcggtcgccatcatgggcgggctgatcgtggca
accgtgctgaccctgttggccttgcctgcaatgtatgccgcggcgttcagggtcaagcgc
gaacctgtcgaaggttcgcaagaggtgctgaaacacgtccccgttagcgcttaa
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