Variovorax sp. PAMC28562: H7F36_20110
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Entry
H7F36_20110 CDS
T10649
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
vax Variovorax sp. PAMC28562
Pathway
vax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H7F36_20110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vax02000
]
H7F36_20110
Transporters [BR:
vax02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
H7F36_20110
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_29
sCache_3_2
AAA_22
nSTAND3
AAA_25
Rad17
Motif
Other DBs
NCBI-ProteinID:
QNK73381
UniProt:
A0A7G8VZ38
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Position
4293537..4294796
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AA seq
419 aa
AA seq
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MGFVDRPGGFNFNGSARPDTPAGTDAGIRLASLLASEARSVHHGGQLRDTPLNIPKTAEP
LVRFQRVQKTYDGEHLVVRQLDLDIHRGEFLSLLGPSGSGKTTTLMMLAGFESPTSGDIL
LNGRQITGTPPHKRHFGMVFQNYALFPHLTVGQNVAYPLTVRKVSKDDQTTRVKRALDMV
QLKGMTDRLPGQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQLELKEIHR
QLGVTFVYVTHDQGEALTMSDRVAVFNEGVIQQLDTVDRLYEMPANRFVAGFVGDNTVLK
GTLQTAGEHAVMALPDGRLLGGLNVGGSAAGAAVEMCIRPERVVLHPAGSAPSENTLAAE
VARVIYYGDHLRLLCNVGAGQAEATVKLPMSGLIGLTPPQAGDSVSLELPVVHTRIYAV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtcgaccggcccggaggcttcaattttaacggttcggcaaggcccgacaca
cccgcggggacagatgcaggcatccgacttgctagtctgcttgccagtgaggcaaggtct
gttcatcatggcgggcaacttcgcgacaccccattgaatattccaaaaaccgccgaaccc
ctagtgcgcttccagcgcgtccagaagacctacgacggcgagcatctcgtggtgcgccag
ctcgacctggacatccatcgcggcgagttcctgagcctgctcggcccgtcgggctcgggc
aagacgaccacgctgatgatgctggcaggcttcgagtcgccgacttcgggcgacatcctg
ctgaacggccggcagatcaccggtacgccgccgcacaagcggcacttcggcatggtgttc
cagaactacgcgctgttcccgcacctgacggtcgggcaaaacgtcgcatatccgctcacg
gtgcgcaaggtgtccaaggacgatcagacgactcgggtgaagcgcgcgctcgacatggtg
cagctcaagggcatgaccgataggctgccgggccagctctcgggtggccagcagcaacgt
gtggcgctcgcgcgcgcgctggtcttcgagccacagttggtgctgatggacgagccgctg
ggcgcgctcgacaagcagctgcgcgagcacatgcaactcgagctgaaggaaatccatcgc
cagctcggcgtgaccttcgtctacgtgacgcacgaccagggcgaagcattgaccatgagc
gaccgcgtggcggttttcaacgagggcgtgatccagcagctcgacaccgtcgaccggctc
tacgaaatgccggccaaccgcttcgtggcagggttcgtcggtgacaacactgtgctcaag
ggaacgctccagaccgcgggagagcatgccgtcatggcgctgccggatggccgcctgctc
ggtgggctgaacgtcggcggctcggctgccggcgccgctgtagagatgtgcatccggccc
gagcgcgtggtgctgcaccccgcaggctcggcacccagtgaaaacacgcttgcggccgag
gtggcacgcgtcatctactacggcgaccacttgcggctgctctgcaacgtcggcgccggg
caggccgaagccaccgtcaagctgccgatgtccgggctcatcggcctgacgccaccgcag
gctggcgacagcgtttcgctcgaattgccggtcgttcatacgcgtatctacgcggtgtag
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