Variovorax sp. PAMC28562: H7F36_21310
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Entry
H7F36_21310 CDS
T10649
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vax Variovorax sp. PAMC28562
Pathway
vax00730
Thiamine metabolism
vax01100
Metabolic pathways
vax01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vax00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
H7F36_21310 (thiC)
Enzymes [BR:
vax01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
H7F36_21310 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QNK73588
UniProt:
A0A7G8VZP5
LinkDB
All DBs
Position
complement(4536918..4538813)
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AA seq
631 aa
AA seq
DB search
MNAIDKFASLLALTREPFPASTKGVIAGSRPDLNVPVREVALTNGERVSLYDTSGPYTDA
AIDIDVRRGLPSVRDVWVAERGDTESYEGRLHLALDDGATHADRDAQRIAELRAGAAALQ
RTPRRARTGAGQSGNVTQMHYARRGIVTPEMEYVALRENGKREWMAQYMSDAAREKRLAG
NPMGAQIPKIITPEFVRDEVARGRAIIPGNINHPEVEPMAIGRNFKVKINANIGNSAVTS
SIEEEVEKLVWSIRWGADNVMDLSTGRNIHTTRDWIVRNSPVPIGTVPIYQALEKVNGVA
EDLTWEIYRDTLIEQAEQGVDYFTIHAGLRLGFIHLTAGRRTGIVSRGGSIMAKWCITHH
KESFLYTHFEDICDIMKAYDVSFSLGDALRPGCASDANDEAQFAELHTLGELTKIAWKHD
VQTMIEGPGHVPMHLIQANMDEQLKTCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGW
AGTAMLCYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARARDDALSQARFDF
RWQDQFNLGLDPDTAREFHDETLPKDSSKVAHFCSMCGPKFCSMKITQEVREFAALRGLT
ETQALDAGMASKSSEFKAAGGELYIPIVPQA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccatcgacaagttcgcgtctcttctcgcgctcacccgcgaaccctttcccgct
tcgaccaaaggcgtcatcgccggcagccgcccagacctcaacgtgccggtgcgcgaggtg
gcgttaaccaatggcgagcgcgtctcgctctacgacacctccggcccttacaccgatgcc
gcgatcgacatcgacgtgcgccgcggactgccgagcgtgcgcgatgtgtgggtggccgag
cgcggcgacaccgaaagctacgaaggccgcctgcatctggcgctcgacgatggtgccacg
catgccgaccgcgatgcccagcgcattgccgaattgcgtgccggcgccgccgcgttgcaa
cgcacgccacggcgcgcccgcaccggtgccggccagagcggcaacgtgacgcagatgcac
tacgcgcggcgcggcatcgtcacgccggaaatggaatacgtcgcgttgcgcgaaaacggc
aagcgcgaatggatggcgcaatacatgtccgacgccgcgcgcgaaaaacgcctcgccggc
aacccgatgggcgcgcagatcccgaagatcatcacgcccgagttcgtgcgcgacgaagtg
gcccgtggccgcgccatcatcccgggcaacatcaaccatcccgaagtcgagccgatggcg
atcgggcgcaacttcaaggtcaagatcaacgcgaacatcggcaactcggcggtcacctcg
agcatcgaggaagaagtcgaaaagctggtgtggtcgatccgctggggcgccgacaacgtg
atggacctttcgaccggccgcaacatccacaccacgcgcgactggatcgtgcgcaacagc
ccggtaccgatcggcacggtgccgatttaccaggcgctcgagaaggtgaacggcgtggcc
gaagacctgacctgggagatctaccgcgacacgctgatcgagcaggcggagcaaggcgtc
gactacttcaccatccacgccggactgcgcctgggcttcatccatctgacggcggggcgg
cgtaccggcatcgtgtcgcgcggcggctcgatcatggccaagtggtgcatcacgcaccac
aaggagagctttctctacacgcacttcgaagacatctgcgacatcatgaaggcgtacgac
gtgagcttctcgctgggcgatgcgttgcgcccgggctgcgcatcggatgccaacgacgag
gcccagttcgccgaactgcacacgctgggcgagctcacgaagatcgcctggaagcacgac
gtgcaaaccatgatcgaaggaccgggccacgtgccaatgcacttgatccaggccaacatg
gacgagcagctgaagacctgccacgaggcgccgttctacacactcggcccgttgaccatc
gacatcgcgccgggctacgaccacatcgccagcgccatcggcgcggccatgatcggctgg
gccggcaccgccatgctgtgctacgtcacgcccaaggaacacctgggcctgccggaccgc
gacgacgtgaagcagggaatcatcgcctacaagatcgcagcccatgcggccgacgtggcc
aaagggcatccaggggcacgggcgcgtgacgatgcgctgtcgcaggcgcgtttcgacttt
cgttggcaggaccagttcaacctcggtcttgaccccgacacggcacgcgaattccacgat
gagaccttgcccaaggacagcagcaaggtcgcgcacttctgttccatgtgcggcccgaaa
ttctgttcgatgaagatcacgcaggaggtgcgcgagttcgcggcactgcgcggcctgacg
gaaacacaggcgctcgatgcgggcatggccagcaagtccagcgagttcaaggcagccggc
ggcgagctctacattccgatcgtgccgcaggcctag
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