KEGG   Variovorax sp. PAMC28562: H7F36_21355
Entry
H7F36_21355       CDS       T10649                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
vax  Variovorax sp. PAMC28562
Pathway
vax03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vax00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    H7F36_21355 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vax03019]
    H7F36_21355 (orn)
   03009 Ribosome biogenesis [BR:vax03009]
    H7F36_21355 (orn)
Messenger RNA biogenesis [BR:vax03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H7F36_21355 (orn)
Ribosome biogenesis [BR:vax03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    H7F36_21355 (orn)
SSDB
Motif
Pfam: RNase_T Ribosomal_L10 Rv2179c-like pP_pnuc_1
Other DBs
NCBI-ProteinID: QNK73595
LinkDB
Position
complement(4546798..4547430)
AA seq 210 aa
MPEPTDSTGAPTTAATATPASAAAPVTLKKSDLNLVWLDCEMSGLDPEKERLLEIAVVVT
GPDLTPRIEGPVLVIHQTDEVLDAMDAWNKGTHGRSGLVDKVKASTLDEAAAEQQMLEFV
SKYIPKNSSPMCGNTIGQDRRFLVKYMPKLEAYFHYRNLDVSTLKELAKRWKPSAYSSFK
KQQAHTALADVHESIEELAHYRTTFLRLTD
NT seq 633 nt   +upstreamnt  +downstreamnt
atgcctgaacctactgattcgactggtgctccgaccactgctgcaaccgcgacccctgcg
tccgccgcagcgcctgtaacgcttaaaaagagcgacctgaacctggtctggctcgattgc
gagatgagcggcctcgatccggaaaaagagcgcttgctcgagatcgccgttgtcgtcacc
ggtcccgatctgacgcctcggatcgaaggccccgtgctggtcattcaccagaccgacgaa
gtgctggacgccatggatgcgtggaacaagggcacgcatggccgtagcggcttggtcgac
aaggtgaaagcgtcgacgctcgacgaagcggccgccgagcagcagatgctcgagttcgtc
tctaaatacattcccaagaacagctcgccgatgtgcggcaacaccatcggtcaggaccgg
cggtttctggtcaagtacatgccgaagctcgaggcgtactttcactaccgcaaccttgat
gtgagcacgttgaaggaactggccaagcgctggaagccgagtgcgtacagcagcttcaag
aagcagcaagcgcacaccgcactggccgacgtgcacgagtcgatcgaagagctggcgcac
taccgcaccacctttctgcgtttgaccgactga

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