Variovorax sp. YR566: ACTG4X_02890
Help
Entry
ACTG4X_02890 CDS
T11729
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vay
Variovorax sp. YR566
Pathway
vay02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACTG4X_02890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vay02000
]
ACTG4X_02890
Transporters [BR:
vay02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACTG4X_02890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XYV77021
LinkDB
All DBs
Position
complement(605656..606450)
Genome browser
AA seq
264 aa
AA seq
DB search
MNKNGPIALAFNALVIVFMLAPLVVVCIVAFTPENTLTIPTTHFSLRWFKAVFAHPDFMQ
SFWNSLWLALSSATIATLLAVPAGMAITRYEFPGRNFLNGLFLSPLIVPHLVLGVALLRL
FALVGGTGSFGWLVMAHALIVTPYTLRLVVAALVGFDRSAEQAALSLGANQATVFRRITL
PMILPGVTGGWMLSFINSFDEVTMSIFVTAPSTVTLPVRMYMYATESIDPLMAAVSALMV
AITAFAMVLLDRVYGLDRVLVGRR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacggccccatcgccctcgcgttcaacgcgctcgtcatcgtcttcatgctg
gcgccgctggtggtggtgtgcatcgtggcgttcacgcccgagaacacgctgaccattccg
accacgcacttctcgctgcgctggttcaaggcggtgttcgcgcaccccgacttcatgcag
tcgttctggaacagcctgtggctcgcgctgagctcggccaccatcgccacgctgctcgcg
gtgccagccggcatggcgatcacgcgctatgagtttccgggacgcaactttctcaacggc
ctgttcctctcgccattgatcgtgccgcacctggtgctgggcgtggcgctgctgcggctg
ttcgcgctggtcggcggcacgggcagcttcggctggctggtgatggcgcatgcgctcatc
gtcacgccctacacgctgcggctggtggtggcggcgctggtgggcttcgaccgcagtgcc
gagcaggccgcgctgtcgctgggcgcgaaccaggccacggtgttccgccgcatcacgctg
ccgatgatcctgccgggcgtgacgggcggctggatgctgtcgttcatcaacagcttcgac
gaagtgacgatgtcgatcttcgtcaccgcgccgagcacggtgacgctgccggtgcgcatg
tacatgtatgcgaccgagtcgatcgacccgctgatggcagcggtgtcggcgctgatggtg
gcgatcacggccttcgcgatggtgctgctcgaccgcgtgtacggactcgaccgcgtgctg
gtggggcgcagataa
DBGET
integrated database retrieval system
