Variovorax sp. YR566: ACTG4X_04555
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Entry
ACTG4X_04555 CDS
T11729
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
vay Variovorax sp. YR566
Pathway
vay00640
Propanoate metabolism
vay01100
Metabolic pathways
vay01120
Microbial metabolism in diverse environments
vay01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ACTG4X_04555 (prpF)
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Paralog
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Motif
Pfam:
PrpF
DUF3159
Motif
Other DBs
NCBI-ProteinID:
XYV77340
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Position
complement(986587..987780)
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AA seq
397 aa
AA seq
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MASAPQIKIPAVYMRGGTSKGVFFRLQDLPAAARQPGPARDALLLRVIGSPDPYAKQIDG
MGAATSSTSKTVILSRSTRPDHDVDYLFGQVSIDSAFVDWSGNCGNLSAAVGPFAIAQGL
IDRARVPQNGTCTVRIWQANIGKTIVAHVPIARGEVQETGDFELDGVTFPAAEVPLEFID
PADEGDGEGGGAMFPTGKVVEELEVPGVGTLRATLINAGIPTIFVNAGDLGYTGTELQDA
INGDAKALAMFETIRAHGAVKMGLIKDIGEAAKRQHTPKVAFVATPRDYTASSGKAVKAA
DVALLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGERQAVRFGHPSGTLRV
GAEARKVDGEWVVTKALMSRSARVLMEGWVRVPGDSF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgctccccaaatcaagattcccgccgtctacatgcgtggcggcaccagcaag
ggcgtgttcttccgcctgcaggacctgcccgcggcggcgcgccagcccgggccggcgcgc
gacgcgctgctgctgcgcgtgatcggcagccccgacccctacgccaagcagatcgacggc
atgggcgcggccacctcctccacatcgaagaccgtgatcctgtcgcgctccacgcggcca
gaccacgacgtcgactacctgttcggccaggtctccatcgacagcgccttcgtcgactgg
tcgggcaactgcggcaacctgtcggcggcggtcgggccgttcgcaattgcgcagggcctg
atcgaccgggcgcgcgtgccgcagaacggcacgtgcaccgtgcgcatctggcaggccaac
atcggcaagaccatcgtcgcccacgtgccgatcgcccgaggcgaggtgcaggaaaccggc
gacttcgaactcgacggcgtgaccttccctgcggccgaggtgccgctggaattcatcgac
ccggccgacgagggcgacggcgaaggcggcggcgcgatgttcccgaccggcaaggtggtc
gaagagctcgaagtgcccggcgtgggcactttgcgcgccacgctgatcaacgcgggcatt
ccgaccatcttcgtcaacgctggcgacctcggctacaccggcaccgagttgcaggacgcc
atcaacggtgacgcgaaggcactggcgatgttcgagacgatccgcgcgcatggcgcggtg
aagatgggcctcatcaaggacatcggtgaagccgccaagcgccagcacacgcccaaggtg
gccttcgtcgcaacgcccagggactacacggcctccagcggcaaggcagtgaaggcggcg
gacgtggccctgctcgtgcgtgcgctgtcgatgggcaagctgcaccacgccatgatgggt
acggccgcggtcgccatcggcaccgcagcggcgatccccggcacgctggtgaacctcgcg
gccggcggtggcgagcgccaggccgtgcgcttcggccacccatcgggcacgctgcgcgtc
ggcgccgaggcccgcaaggtcgatggcgaatgggtggtgaccaaggccctgatgagccgg
agcgcccgcgtgttgatggaaggctgggtgcgcgtgcctggcgacagtttctga
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