Variovorax sp. YR566: ACTG4X_05200
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Entry
ACTG4X_05200 CDS
T11729
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vay Variovorax sp. YR566
Pathway
vay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACTG4X_05200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vay03400
]
ACTG4X_05200
Enzymes [BR:
vay01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACTG4X_05200
DNA repair and recombination proteins [BR:
vay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACTG4X_05200
Prokaryotic type
ACTG4X_05200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XYV77461
LinkDB
All DBs
Position
1126233..1126940
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AA seq
235 aa
AA seq
DB search
MSRPDQLLSSDPVDWPVAPGWKPLVDDFFGGVVGQKLLGFLRERLDAGAVIFPPQPLRAL
ELTPPEDVRVVILGQDPYHGRGQAEGLAFSVAPGVALPPSLRNIFKELQRDLGTQPPAFP
NPGGSLVKWATHGVLLLNTCLTVEEAQPASHSGRGWEVLTDAVIRHVSDGAKPVVFMLWG
SHAQSKRALIDVKRHKVLMSNHPSPLSALRPPVPFIGCGHFGEARAWREAQRAEG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcccgatcagctgttaagcagcgatcctgtcgactggccggtggcgcctggc
tggaagccactggttgacgatttctttggcggtgtcgtgggacagaagctgctgggcttc
ttgcgcgagcgtctcgatgcgggggcggtgatttttccgccgcagccgctgagggcgctg
gaactcacgccgccggaagatgtgcgcgtggtgatcctgggccaggatccgtaccacggg
cgcggccaggccgaggggctggcgttctccgtggcgcccggcgtggcactgccgccttcg
ctgcgcaacatcttcaaggagctccagcgcgacctgggcacacagccgccagcattcccg
aatccgggcggcagtctggtgaagtgggcgacgcatggcgtactgctgctcaacacctgc
ctgacggtcgaggaagcgcagccggccagccattccggccgtggctgggaggtgctgacg
gatgccgtcattcgccatgtttcagacggcgcaaaacctgttgtttttatgctgtggggc
tcgcacgcgcagagtaagcgggcgttgatcgacgttaagcgccataaggtgctgatgtcg
aatcatccgtcgcctctttcggcgttgcgcccgcccgtgccgttcatcggctgcggccac
ttcggtgaagcgcgtgcgtggcgggaggcccagcgggcggaggggtga
DBGET
integrated database retrieval system
