Variovorax sp. YR566: ACTG4X_05420
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Entry
ACTG4X_05420 CDS
T11729
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
vay Variovorax sp. YR566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
AAA_5
Mg_chelatase
FleQ
DUF815
AAA
AAA_22
BrxC_BrxD
nSTAND6
HTH_28
AAA_2
bpMoxR
AAA_7
HTH_30
FAA_hydro_N_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
XYV77496
LinkDB
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Position
1168151..1169518
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AA seq
455 aa
AA seq
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MSEAPAIRVLLVEDDEDVRISTTQVLTLAGFEVESFASAERARPHIGFGVPAVVISDVRL
PGLSGTEWLPELRNVDAELPVILVTGHGHIAMAVQAMREGAYDFIEKPFSSERLVAIVRH
AIERRQLSLQVRALRDALENWQGIQSVLIGRSAQMQQVRQTVKTLAETSADVLVYGETGT
GKELVARCLHDHSARRRQHFVPLNCGGLPESLAESELFGHEAGAFTGASRMRVGKFEYAS
GGTLFLDEIESMPMAVQIKLLRALQERSIERIGSNKTIPFDCRVVAASKDDLKAMSDQQK
FRADLYYRLGVAFIELPPLRERREDIPLLFEHFTLQAASRYERPAPLLSNAQLADLMAYA
WPGNVRELRNVADRFVLGLLGERLTQTRGGNSAEGVPALPRGLPQQVESFERAVIVEELR
RQHGDQPATAAALGIARQTLHDKVRKLGVTVDEFK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagcccctgccatccgggtgctgctggtcgaggacgacgaagacgtccgcatc
agcacgacccaggtgctgaccctggccggtttcgaggtcgaatctttcgccagcgccgag
cgcgcgcggccgcacatcggcttcggcgtgccggccgtcgtcatcagcgacgtgcgcctg
ccgggcctgagcggcaccgagtggctgcccgagctgcgcaacgtcgatgccgaactgccc
gtgatcctggtcaccggccacggccacatcgcaatggccgtgcaggccatgcgcgagggc
gcctacgacttcatcgaaaagcctttcagctccgagcggctggtggccatcgtgcgccat
gccatcgagcgccgccagctcagccttcaggtgcgcgcgctgcgcgacgcgctggaaaac
tggcagggcatccagtcggtgctgatcggtcggtcggcgcagatgcagcaggtgcgccag
accgtgaagacgctggccgagacctccgccgacgtgctggtctacggcgagaccggcacc
ggcaaggagctggtcgcgcgctgcctgcacgaccacagcgcgcgccgccggcagcatttc
gtgccgctcaattgcggcggcctgcccgagtcgctggccgagagcgagctgttcggccac
gaggccggcgcattcaccggcgccagccgcatgcgcgtgggcaagttcgaatacgccagc
ggcggcacgctgttcctcgacgagatcgagagcatgccgatggcggtgcagatcaagctg
ctgcgcgcgctgcaggagcgcagcatcgagcgcatcggctccaacaagaccattcccttc
gactgccgcgtggtggccgcgagcaaggacgacctgaaggccatgagcgaccagcagaag
ttcagggccgacctgtactaccgcctgggcgtggccttcatcgagctgccgccgctgcgt
gagcggcgcgaagatattccgctgctgttcgagcacttcaccctgcaggccgcgagccgc
tacgagcgccccgcgccgctgctgagcaatgcgcagctcgccgacctgatggcctacgcc
tggcccggcaacgtgcgcgaactgcgcaacgtggccgaccgcttcgtgctgggcctgctc
ggcgagcgcctgacgcagacgcgcggcggcaacagcgccgaaggcgtgcccgccctgccg
cgcgggttgccgcagcaggtggagtcgttcgaacgcgcggtgatcgtcgaggagctgcgc
cgccagcacggcgaccagccggccacggctgccgcactgggcattgcgcgccagacgctg
cacgacaaggtgcgcaagctgggcgtgactgtggacgagttcaagtaa
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