Variovorax sp. YR566: ACTG4X_10935
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Entry
ACTG4X_10935 CDS
T11729
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
vay Variovorax sp. YR566
Pathway
vay03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ACTG4X_10935 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
vay03011
]
ACTG4X_10935 (rpsA)
Ribosome [BR:
vay03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ACTG4X_10935 (rpsA)
Bacteria
ACTG4X_10935 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_PDCD11
GCS
SH3_9
Motif
Other DBs
NCBI-ProteinID:
XYV78550
LinkDB
All DBs
Position
complement(2354973..2356661)
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AA seq
562 aa
AA seq
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MSESFADLFEESLKRSEMRTGEVITAEVVRVEHNHVVVNAGLKSEAYVPIEEFKNDKGEL
EVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWLALEKALESGDFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGAVVRGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVQAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWMGVSRRYPQSTRLFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNIAPNKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNEAGETAVRNYKKGQEVEAIVL
AVDVDRERISLGIKQLDSDPFTTFTTVNDKGQIVTGKVKTVDARGAEIDLGEDIIGYLRA
SEISRDRVEDARNVLKEGDEVTAIVVNVDRKTRNIQLSIKQKDMVDEQGAMASLSQQSAR
ENAGTTSLGALLRAKLDNNDSK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgacctattcgaagagtccctgaagcgttccgaaatgcgcacc
ggcgaggtcatcacggccgaagtcgtgcgtgtcgaacacaaccacgtcgtcgtcaacgcc
ggtctgaagtccgaagcgtatgtgccgatcgaagagttcaagaacgacaagggcgaactc
gaagttcaggccggcgatttcgtttccgttgccatcggcagcgttgaaaacggctacggc
gacaccatcctctcgcgcgacaccgccaagcgtctggcttcgtggctcgccctcgagaag
gcactggaatcgggcgacttcgtcaccggcaccaccagcggcaaggtcaagggcggcctc
acggtcctggtcaacggcatccgcgcattcctgccgggctcgctgatcgacacgcgtccg
atcaaggacctgaccccgtacgagaacaagaccctcgagttcaaggtcatcaagctcgac
cgcaagcgcaacaacgtcgtgctgtcgcgccgtgccgtggtcgaagccagcatgggcgaa
gaacgcgccaagctgatggaaacgctgaaggaaggcgcagtcgtgcgcggcgtggtcaag
aacatcaccgaatacggtgcgttcgtggacctcggcggcatcgacggcctgctgcacatc
accgacatggcatggcgccgtgttcgccacccgagcgaagtcgttcaggccggccaggaa
atcaccgccaagatcctcaagttcgacaccgagaagaaccgtgtctcgctgggtctcaag
caaatgggtgacgacccgtggatgggcgtttcgcgccgctacccgcaatcgacccgcctg
ttcggcaaggtcacgaacattgccgactacggcgcgttcgtcgaactcgaacccggcatc
gaaggcctggtgcacgtctccgaaatggactggaccaacaagaacatcgctccgaacaag
atcgtctcgctgggcgacgaagtcgaagtcatggtcctggaaatcgacgaagacaagcgc
cgcatcagcctgggcatgaagcaatgcaaggccaacccgtggcaagagttcgcgcaaaac
accaagcgcggcgaccgcgtcaagggcccgatcaagtcgattaccgacttcggcgtgttc
gtgggtctggctgccggcatcgacggcctggttcacctctcggacctctcgtggaacgaa
gccggcgaaaccgccgttcgcaactacaagaagggccaggaagtcgaagcgatcgtgctg
gctgtggacgtcgaccgcgagcgcatcagcctcggtatcaagcagctcgacagcgacccg
ttcaccacgttcaccaccgtgaacgacaagggccagatcgtgaccggcaaggtcaagacc
gtggacgcccgcggcgctgaaatcgacctcggcgaagacatcatcggctacctccgtgct
tcggaaatctcgcgcgaccgcgtcgaagatgcccgcaacgtgctgaaggaaggcgacgaa
gtcaccgccatcgtcgtgaatgtggatcgcaagacccgcaacatccagctgtcgatcaag
cagaaggacatggtcgacgaacaaggcgccatggccagcctgagccagcagtcggcacgc
gaaaacgcgggcacgaccagcctgggcgccctgctgcgcgccaagctcgacaacaacgac
agcaagtaa
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