Variovorax sp. YR566: ACTG4X_12810
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Entry
ACTG4X_12810 CDS
T11729
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vay
Variovorax sp. YR566
Pathway
vay02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACTG4X_12810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vay02000
]
ACTG4X_12810
Transporters [BR:
vay02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACTG4X_12810
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Paralog
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Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XYV78918
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Position
complement(2732384..2733274)
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AA seq
296 aa
AA seq
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MSQRIGEQRSPGFWPLATVFALFVLFLYGPMITIFVLSFQGPEGGLTFPLRGVSLHWFYK
LAEGLGTVDIGAAFRRSLALGAVVMAFTVVLSVLAGLAFRKKLAGSNALFFVTVASLIMP
SIIISLGIGLQFRLIDTGIKSVLTAMDATTLLEGYGTALGLFSSALGAHLTWTLPFGLLI
MFAVFNRFNPAYEEAARDLGATPWQTFRFVVLPLIGPSIVGIGMFGFTLSWDEIARTSQA
IGDVNTLPLELQGLTSTVTTPSIYALGTVTTVVSLLVMAVALGSAALLRRRAVRPR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacgcataggcgaacaacgcagccctggcttctggcctctcgctacggtcttc
gccctgttcgtgctgttcctctacggcccgatgatcacgatcttcgtgctcagcttccag
ggccccgagggcggtctcaccttcccgttgcgcggcgtctcgctgcactggttctacaag
ctggctgaagggctgggcacagtggacatcggcgcggccttcaggcgctcgctggcgctg
ggcgcggtggtgatggccttcactgtcgtgctgtcggtgctggcgggcctggcgttccgc
aagaagctcgcgggcagcaacgccctgttcttcgtcacggtggccagcctcatcatgccg
tcgatcatcatctcgctcggcatcggcctgcagttccggctgatcgacacgggcatcaag
agcgtgctgacggcgatggacgcgaccacgctgctcgaaggctacggcaccgcgctgggc
ctgttcagttccgccctcggcgcgcacctgacctggacgctgcccttcggcttgctcatc
atgttcgcggtgttcaaccgcttcaaccccgcctacgaagaagccgcgcgcgacctcggc
gccacgccgtggcagacctttcgcttcgtggtgctgccgctgatcggcccgtcgatcgtg
ggcatcggcatgttcggcttcacgctgtcgtgggacgagatcgcccgcacctcgcaggcc
atcggcgacgtcaacacgctgccgctcgagctgcagggcctgacgtcgaccgtcaccacg
ccgtcgatctatgcgctgggcacggtgaccaccgtcgtgtcgttgctcgtgatggccgtg
gcgctgggctcggccgcgctgctgcgccgcagggctgtgcggcccaggtga
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