Variovorax sp. YR566: ACTG4X_14670
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Entry
ACTG4X_14670 CDS
T11729
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
vay Variovorax sp. YR566
Pathway
vay03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACTG4X_14670 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vay03400
]
ACTG4X_14670 (uvrB)
DNA repair and recombination proteins [BR:
vay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACTG4X_14670 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACTG4X_14670 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_25
AAA_16
Microtub_bd
MTR4_beta-barrel
Motif
Other DBs
NCBI-ProteinID:
XYV79275
LinkDB
All DBs
Position
3166803..3168920
Genome browser
AA seq
705 aa
AA seq
DB search
MPENNEAIADLKKLDPIGPAKQGEFIRYPDSPFELFQPYQPAGDQPKAIEGLVEGVIDGE
VFQTLLGVTGSGKTFTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSY
YDYYQPEAYVPQRDLFIEKDSSINEHIEQMRLSATKSVLERRDTVIVATVSAIYGIGTPE
DYMEMRLIARVGDKVGQRDLISRLIRMQYLRNEQDFARGTFRVRGDTIDVFPAEHSELAI
RFELFDDEIESLQLFDPLTGRIRQKVPRFTVYPSSHYVTPRDKVMAAVETIKIELGDRLK
ELVGAGKLVEAQRLEQRTRFDLEMLAEIGHCKGIENYTRHLSGAAPGDPPATLTDYLPKD
ALMFLDESHQMIGQLSAMYNGDRARKTTLVEYGFRLPSALDNRPLKMEEFEKRMRQCIFV
SATPAQYEKDHAGNVVEQLVRPTGLIDPEVEVRPATHQVDDVLGEIRVRVDKNERVLITT
LTKRMAEQLTDYLGDNGVKVRYLHSDVDTVERVEILRDLRLGTFDVLVGINLLREGLDIP
EVSLVAILDADKEGFLRAERSLIQTIGRAARNLNGKAILYADRMTESMKKAIGETERRRA
RQIAYNEANGITPRSIVKQVRDLIDGVYSEKTGKEMAKLDLERAKVEDMSEKDIAREIKR
LEKQMLEHARNLEFEKAARVRDQLALLREQAFGASGGDNIAIPPQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagagaacaacgaagccatagcagacctgaagaaactggacccgatcgggccggcg
aaacagggggaattcatccgctatccggactcgcctttcgagcttttccagccctatcaa
ccggccggcgaccagccgaaagcgatcgaggggctggtcgagggcgtgatcgatggcgaa
gtgttccagaccctgctgggcgtgaccggttcgggcaagaccttcaccatggccaacgtg
atcgcccggctgggccgcccggccatcgtgtttgcgcccaacaagacgctggcggcgcag
ctctacagcgaattccgagagttcttcccgaagaacgccgtcgagtacttcgtgagctac
tacgactactaccagcccgaggcctatgtgccccagcgcgacttgttcatcgagaaagat
tcatcgatcaacgagcacatcgagcagatgcggctgtcggccaccaagagcgtgctggag
cggcgcgacaccgtcatcgtggccacggtgagcgccatctacggcatcggcacgcccgag
gactacatggagatgcggctgattgcccgcgtcggcgacaaggtcggccagcgcgacctg
atctcgcggctcatccgcatgcagtacctgcgcaacgagcaggactttgcccgcggcacc
tttcgcgtgcggggcgacaccatcgacgtgttcccggcggagcacagcgagctggcgatc
cgcttcgagctgttcgacgacgagatcgagtcgctgcagctcttcgacccgctgaccggc
cgcatccgccagaaggtgccgcgcttcaccgtgtatccgtcgagccactacgtcacgccg
cgcgacaaggtcatggcggcggtggaaaccatcaagatcgagcttggcgatcggctcaag
gaactggtgggggcgggcaagctggtcgaggcgcagcggctggagcagcgcacccgtttc
gacctcgaaatgctcgccgaaatcggccattgcaagggcatcgagaactacacgcgccac
ctctcgggcgctgcgccaggcgacccgccggcaacgctgaccgattacctgccgaaggac
gcgctgatgttcctcgacgaaagtcaccagatgatcggccagctcagcgccatgtacaac
ggcgaccgggcgcgcaagaccacgctggtcgagtacggctttcgactgccgagtgcgctg
gacaaccggccgctcaagatggaagagttcgaaaagcgcatgcgccagtgcatcttcgtt
tcggccacgccggcgcaatacgagaaggaccatgccggcaacgtggtcgaacagctggtg
cggcccaccggactgatcgaccccgaggtcgaggtgcggcccgccacgcatcaggtggac
gacgtgctgggcgagatccgcgtgcgcgtggacaagaacgagcgcgtgctgatcaccacg
ctgaccaagcgcatggccgagcagctgaccgactacctgggcgacaacggggtgaaggtg
cgctacctgcacagtgacgtcgacacggtcgagcgggtggaaatcctgcgcgatctgcgc
ctgggcaccttcgacgtgctggtgggcatcaatctgctgcgcgaggggctggatattccc
gaggtatcgctggtggcgatcctcgacgccgacaaggaaggcttcttgcgcgcagagcgc
tcgctgatccagaccattggccgcgcagcgcggaacctgaacggcaaggccatcctctac
gccgaccggatgaccgagtcgatgaagaaggccatcggcgaaaccgagcgccgccgtgcc
cggcagattgcctacaacgaagccaacggcatcacgccgcgcagcatcgtcaagcaggtg
cgcgacctgatcgacggtgtctacagcgagaaaacgggcaaggaaatggccaagctcgac
ctggaacgcgccaaggtcgaggacatgagcgaaaaggacatcgcccgggagatcaagcgg
ctggaaaagcagatgctggaacacgcccgcaacctcgaattcgagaaggcagcccgggtg
cgcgaccagttggcgctgctgcgggagcaggcgttcggggcgtcgggcggcgacaacatc
gcgataccgccgcagtag
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