Variovorax sp. YR566: ACTG4X_28190
Help
Entry
ACTG4X_28190 CDS
T11729
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
Organism
vay Variovorax sp. YR566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
XYV75347
LinkDB
All DBs
Position
6039919..6042321
Genome browser
AA seq
800 aa
AA seq
DB search
MHFPKSLAAASALLASLVALPAWAVEPFTVRDIKLEGLQRVEPGTVFATMGLRAGDTYSD
ERGSAAIRELFKLGLFKDVRIDVNGNVLVVVVEERPSIADVDFVGTKEFDKAALQKALRE
VGIAEGQAYDKALADRAEQELKRQYISRSLYNAQVITTVTPLENNRVNLTFTVTEGESAR
IKEVHVVGNKAFSESTLLDLFDQDTGGWLDWYTKSNQYSRTKFNGDLETLRSYYITRGYL
EFRIESTQVAISPDRQTLTLTINIIEGQKFVVAGVKLAGDYVGHEDEFKTLVTIRPGAPY
NGEDVAATTKAFTDYFGTFGYAFARVKAEPEIDRENNRVTLVLKAESSRRAYVRRINIGG
NARTRDEVIRREFRQYEGAWYDGNKIRASRDRVDRLGFFTEVNVDTVDVPGSPDQVDLVV
NVAEKPTGSLQLGAGYSSTDKVSLSFGITQENVFGSGNYLGLNVNTSSYNRTISVTATDP
YFTKDGISRTINVFHTTTRPYYEADGNYKLASDGGSIRFGFPVGEQDTVYLGIGVERYSF
TPGTNGTYTLVDGSYVYTATPQAYLDYFKCSGTVPNVTCAKSSVVGIPATLGWSRDDRDS
ALVPTRGRLQSANLEMGVGSELRYLKTNYQYQQYFPLSKQYTLAINGQLGYARALGDSTY
PIFKNFYAGGLGSIRGFEQNSLGPKDSVTDGALGGTRKAIFNMEFSTPFPGAGNDKTLRL
YTFFDAGNVFADRTASMTDAQWRAQNRIRASAGIGISWISPLGPLRLAYAVPLIYQKEDT
ANGISADRTQRFQFQIGTSF
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcactttcccaagtccctcgcagcggccagcgcgctgcttgcctctctcgtcgctctt
cccgcctgggccgtcgaaccgttcaccgtcagggacatcaagctggagggcctccagcgc
gtcgagcccggcaccgtcttcgccaccatgggccttcgcgccggcgacacctacagcgac
gagcgcggcagcgccgccatccgcgagctgttcaagctcggcctcttcaaggacgtgcgc
atcgacgtgaacggcaacgtgctggtggtggtggtggaagagcgcccctccatcgccgac
gtcgacttcgtgggcaccaaggagttcgacaaggccgcgctgcagaaggcgctgcgcgag
gtgggcatcgcagaagggcaggcctacgacaaggcactggccgaccgggccgagcaggag
ctcaagcggcagtacatcagccgcagtctttacaacgcacaggtcatcaccaccgtcacg
ccgctggagaacaaccgcgtgaacctgaccttcaccgtgaccgaaggcgagtccgcacgc
atcaaggaagtgcacgtggtcggcaacaaggccttcagcgaaagcacgctgctcgacctg
ttcgaccaggacaccggcggctggctcgactggtacaccaagtccaaccagtactcgcgc
accaagttcaacggcgacctggagacgctgcgctcctactacatcacgcgcggctacctg
gagttccgcatcgagtcgacgcaggtcgccatctcgccggaccggcagacgctgaccctc
accatcaacatcatcgaaggccagaagttcgtggtggccggcgtgaagctcgcgggcgac
tacgtgggccacgaggacgagttcaagacgctggtgaccatccgccccggcgcgccctac
aacggcgaagacgtggccgccaccaccaaggcctttaccgactacttcggcaccttcggc
tatgccttcgcacgcgtgaaggccgagcccgagatcgaccgcgagaacaatcgcgtcacg
ctggtgctgaaggccgagtcctctcgccgtgcgtacgtgcggcgcatcaacatcggcggc
aatgcgcgcacgcgcgacgaggtgatccgccgcgagtttcgccagtacgaaggcgcctgg
tacgacggcaacaagatccgcgcctcgcgcgaccgggtcgaccgcctgggcttcttcacc
gaagtgaacgtcgacaccgtcgacgtgcccggctcgcccgaccaggtcgacctggtggtg
aacgtggccgagaagccgaccggctcgctgcagctgggcgcgggctactcgtccaccgac
aaggtctcgctgagcttcggcatcacgcaggagaacgtgttcggcagcggcaactacctg
gggctgaacgtgaacacgagctcgtacaaccgcaccatctcggtcacggcgaccgacccg
tacttcaccaaggacggcatctcgcgcacgatcaacgtgttccataccaccacgcggccg
tactacgaggccgacggcaactacaagctcgcgagcgacggcggctccatccgattcggc
tttccggtgggcgagcaggacacggtgtacctggggatcggcgtggagcgctattcgttc
acgccaggcaccaacggcacctacacgctggtcgacggctcgtacgtgtacaccgccacg
ccgcaggcctacctcgactacttcaagtgctcgggcaccgtgccgaacgtgacctgcgcg
aagtcgagcgtggtgggcatcccggccacgctgggctggtcgcgcgacgatcgcgacagc
gcgctggtgcccacgcgcggccggctgcagagcgccaacctcgagatgggcgtaggcagc
gagctgcgctacctgaagaccaactaccagtaccagcagtactttccgctgtccaagcag
tacacgctggccatcaacggtcagctcggctatgcgcgggcactgggcgacagcacctac
ccgatcttcaagaacttctacgccggcgggctcggctcgatccgcggcttcgagcagaac
tcgctcggcccgaaagactcggtcaccgacggcgcgctcgggggcacgcgcaaggcgatc
ttcaacatggaattcagcacgcccttcccgggtgcgggcaacgacaagacgctgcgcctg
tacaccttctttgacgcgggcaacgtgttcgccgaccgcaccgccagcatgacggacgcg
caatggagggcacagaaccgcattcgcgcatctgccggcatcggcatcagctggatctcg
ccgctcggcccgctgcgactggcctatgcggtgccgctgatctaccagaaggaagacacg
gccaacggcatctcggccgaccgcacgcagcgcttccagttccagatcggaacctccttc
tga
DBGET
integrated database retrieval system
