Variovorax sp. YR566: ACTG4X_31170
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Entry
ACTG4X_31170 CDS
T11729
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vay
Variovorax sp. YR566
Pathway
vay02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vay00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACTG4X_31170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vay02000
]
ACTG4X_31170
Transporters [BR:
vay02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ACTG4X_31170
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Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
XYV75911
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Position
6650597..6651853
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AA seq
418 aa
AA seq
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MHAATSVPLVPAEAPPGELRRALARAEARRKWRAFALTVPLLVFLLLTLLVPIVALLQRA
VENPEVANALPRTVRALDGWNRKEAPAPAAFAAIAADLAQLPDSSDAGALARRLNTEIAG
ARSLVMGTFRALPIAGTPEEVKARMLELDPRWGEAPYWQAIAKNGSRWTPDYLLASVDLR
RDVAGEVERMPADQRAFAGILLRTFQISAVVTFFCLLLAYPLAWWLSTLPARKANVLMIL
VLVPFWTSILVRVAAWIVLLQSEGLVNRGLMGIGLIDHPLALLFNRTGVIIAMVHILLPF
MILPLYSVMKSVPPTYLRAAVSLGSSPLAAFFRVYVPQTYPGIGAGALLVFILAIGYYVT
PALLGGADDQMLSYYIARYTNVEINWGMACALGSVLLVATLILYAVYRRIGKAELSLG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcggcaacgtctgtccccctggttccagcagaagcgccgcccggcgaactgcgg
cgtgcgctggcgcgcgccgaagcccgccggaagtggcgcgcgtttgcgctcacggtgccg
ctgctggtgtttctgctgctgactctgctggtgcccatcgtggcgctgctgcagcgtgcg
gtagaaaaccccgaggtggccaacgcgctgccgcgcaccgtgcgcgcgctcgacggctgg
aaccgcaaggaggcgcccgcgccggcggcctttgcagccatcgcggccgatctcgcccag
ctgcccgacagctccgacgcgggcgccctggcgcgccgcctcaacaccgagatcgccggc
gcccgctcgctggtgatgggcaccttccgtgcgctgccgatcgccggcacgccggaagag
gtcaaggcgcgcatgctggagctcgacccgcgctggggcgaggcgccgtactggcaggcg
attgccaagaacggctcgcgctggacgcccgactacctgctcgcctcggtcgacctgcgg
cgcgacgtggccggcgaggtcgagcgcatgcccgccgaccagcgcgcctttgccggcatc
ctgctgcgcaccttccagatcagcgccgtcgtcaccttcttctgcctgctgctggcctat
ccgctggcgtggtggctgtcgacgctgcccgcgcgcaaggccaacgtgctgatgatcctg
gtgctggtgccgttctggacttccatcctggtgcgcgtagcggcctggatcgtgctgctg
cagtccgaggggctggtcaaccggggcctcatgggcatcggcctgatcgaccatccgctg
gcgctgctgttcaaccgcaccggcgtgatcatcgcgatggtgcacatcctgctgcccttc
atgatcctgccgctgtacagcgtcatgaagagcgtgccgcccacctacctgcgcgcggcc
gtctcgctgggcagctcgccgctggcggccttcttccgcgtttacgtgccgcagacctac
ccgggcatcggcgccggcgcgctgctggtcttcatcctggcgatcggctactacgtgaca
ccggcgctgctcggcggcgcggacgaccagatgctgagctactacatcgcgcgctacacc
aacgtcgaaatcaactggggcatggcgtgcgcgctgggctccgtactgctggtcgccacg
ctgattctgtatgccgtgtaccgccgcatcggcaaggccgagctgagcctcggatga
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