KEGG   Variovorax sp. PAMC26660: H7F35_04185
Entry
H7F35_04185       CDS       T10234                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
vaz  Variovorax sp. PAMC26660
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_04185 (tssC)
Secretion system [BR:vaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F35_04185 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QNK68934
LinkDB
Position
890713..892212
AA seq 499 aa
MANKSKAAEAGSAATTVTTSDMGLLDKIVQEGNMTTEPSQGAYAKKLIGQLASQILDEGM
KTSPDKGVVTLINERVAEIDRLLTDQLNAILHAPEFQALEGSWRGLRDMVFGTETGSNLK
LRLLNVSKKDLLKDLETAVDHDTSVLFKKIYEEEYGTYGGHPYSLLIGDYYFGRHPQDIA
LLERVSRVAAAAHAPFIAAAAPALFDFKSFTELGIPRDLSKTFESAELASWRSFRESEDS
RYVSLVLPSYAARLPYGAKTNPVENFNYEEDVDGSDHGKYLWANAAYQLGLRITQAHSLY
GWTTAIRGVEGGGKVDGMVAHAYKTDEGDIALKPPTEVTITDRREKELSDLGFIAIVNSK
GSNTAAFFGGQTVNKPKVYDKDAANANAAVSARLPYILAASRFAHYLKVIVRDKVGSFQT
QTDMQKHLNNWVANYVLVSPSAPQAMKAKYPLSQARVDVTEVPGKPGSYRAIAFLKPHFQ
LEELSASIRLVADLPAAAA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atggccaacaaatccaaagccgccgaagccggcagcgcagcaaccaccgtcacgaccagt
gacatgggtctgctcgacaagatcgtccaagaaggcaacatgacgaccgagccttcgcag
ggcgcctacgcgaagaagctgatcggtcagctggcttcgcagatcctcgacgaaggcatg
aagaccagccccgacaagggcgtggtcacgctgatcaacgagcgcgtcgccgaaatcgac
cgcctgctgaccgaccagctcaacgcgatcctgcacgcccccgagttccaggccctcgaa
ggctcctggcgcgggctgcgcgacatggttttcggcaccgagaccggcagcaacctgaag
ctgcgcctgctcaacgtgagcaagaaagacctgctcaaggacctggagaccgccgtcgac
cacgacaccagcgtgctcttcaagaagatctacgaagaggaatacggcacctacggcggc
cacccctactcgctgctgatcggcgactactacttcggccgccacccgcaagacatcgcc
ctgctggagcgcgtctcccgcgtggccgccgccgcgcacgcgcccttcatcgccgccgcc
gcgcccgccctgttcgacttcaagtcgttcaccgaactgggcattccgcgcgacctgtcc
aagaccttcgagagcgccgagctcgcctcgtggcgcagcttccgcgaatcggaagactcg
cgctacgtgtcgctggtgctgcccagctacgccgcgcgcctgccctacggcgccaagacc
aaccccgtcgagaacttcaactacgaagaagacgtggacggctccgaccacggcaagtac
ctctgggccaacgcggcctaccagctgggtctgcgcatcacgcaggcgcattcgctgtac
ggctggaccaccgccatccgcggcgtcgagggcggcggcaaggtcgacggcatggtggcc
cacgcctacaagacggacgaaggcgacatcgcgctgaagccgccgacggaagtgaccatc
accgaccgccgcgaaaaggaactgagcgacctgggcttcatcgccatcgtcaattccaag
ggctcgaacaccgcagccttcttcggcggccagaccgtgaacaagcccaaggtgtacgac
aaggacgcggccaacgccaacgcggcggtctcggcgcgcctgccctacatcctggcggct
tcgcgtttcgcgcattacctgaaggtgatcgtgcgcgacaaggtcggcagcttccagacg
cagaccgacatgcaaaagcacctgaacaactgggtcgccaactacgtgctggtgagcccc
tcggcgccgcaggccatgaaggccaagtacccgctgagccaggcccgcgtggacgtgacc
gaagtgccgggcaagccgggctcgtaccgcgccatcgccttcctgaagccgcacttccag
ctcgaggaactctcggcctcgatccgcctggtggccgacctgccggccgcagccgcctga

DBGET integrated database retrieval system