KEGG   Variovorax sp. PAMC26660: H7F35_04210
Entry
H7F35_04210       CDS       T10234                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
vaz  Variovorax sp. PAMC26660
Pathway
vaz03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vaz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    H7F35_04210 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vaz02044]
    H7F35_04210 (tssH)
Secretion system [BR:vaz02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   H7F35_04210 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA Clp_N AAA_5 AAA_22 ClpB_D2-small AAA_16 NBD_SMAX1 TniB AAA_7 Sigma54_activat nSTAND3 Zeta_toxin AAA_25 NACHT nSTAND1 DUF815 SRP54 Aldolase_II T2SSE SLFN-g3_helicase HGD-D Dor1
Other DBs
NCBI-ProteinID: QNK68938
LinkDB
Position
896035..898776
AA seq 913 aa
MDIDIRTLLGRLNPECKRAMEQAAELCVQQTHYNVDLEHLLLKLVDNEAPDLRLVFGRFG
IRPDAVQAQLQKSLDTFKRGNGRTPSLAPDFAPLFQEAWLMSSMLLGQQHIRSGTLMLAL
LEVDRLRGRLVDAAPALLQIPRGTLRDELAGLLQSSPEDAAASALANAPVAPAASAPAVN
QPAAPSASAAGTPPLQMPTARRNNSATPSLDQYTVDMTQLARDGAIDPIRGRDGEIRQII
DVLLRRRQNNPILTGEAGVGKTAVVEGFAQRVVQGDVPPALRQVSVRSLDLALLQAGAGV
KGEFENRLKSVIAEVKASPTPVILFIDEAHQLIGAGGAEGQGDAANLLKPALARGELRTI
AATTWAEYKKYVERDPALARRFQVVKIEEPSEEVAIDMLRGMVETLEKHHGVEIVDDAVR
EAVKLSHRYITGRQLPDKAISVLDTACARVAIGQNGLPAELESAARDIATGESELRVLRH
EAATGGDHQDAIATLGARLDTLRQKHKRLSDKVDEEKHAVMEIVALRRKISDSLRDNAPP
PDEENDPALLTAALRRLEKGLEALQSDEPMVPVCVDGVMVAEVISGWTGIPVGKMMTDEL
HTVLNLKEKLAERVVGQDDALDAIARRVRTFRADLDDPGKPVGVFMLVGPSGVGKTETAF
ALADLLYGGERNVITVNMSEFQEAHTVSSLKGAPPGYVGYGRGGVLTEAVRRRPYSVVLL
DEMEKAHPDVLELFFQVFDKGTMEDGEGVQIDFKNTLILLTSNAAQDVITQASQGGRRPD
PEELVERLRPELLKQFSPAFLGRLALVPYHHLGDEQIRSIANLKLGKLARRFALNHHAAF
TWDVQVEDAITARCTEVDSGARNIDHILAHAVLPELSRQVLERISMAAAFTAVHMGMDGD
GAFAFRFEPATLS
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggacatcgacatccgcaccctgctcggccggctcaaccccgaatgcaagcgcgccatg
gaacaggcggccgagctgtgcgtgcagcagacgcactacaacgtcgacctcgaacacctg
ctgctgaagctggtggacaacgaagcacccgacctgcggctggtgttcggccgcttcggc
atccggcccgatgccgtgcaggcgcaactgcagaagtcgctcgacaccttcaagcggggc
aacggccgcacgccgagcctggcgcccgactttgcgccgctgttccaggaagcctggctc
atgagctcgatgctgctgggccaacaacacatccgctcgggcacgctgatgctggcgctg
ctggaggtggaccggctgcgcggtcgcctcgtcgacgccgcgcctgcgctgctgcagatt
ccgcgcggcacgctgcgcgacgaacttgccggcctgctgcagtcctcgcccgaggacgca
gccgcttcggcactggccaatgccccggtggcgccagcggcatcggcgcccgccgtgaac
cagccggccgcgccatcggcgtcagccgccggcacaccgccgctgcagatgcccaccgcg
cgccgcaacaactcggccacgccctcgctcgaccagtacaccgtcgacatgacgcagctc
gcgcgcgacggcgcgatcgacccgatccgtggccgcgatggcgaaatccgccagatcatc
gacgtgctgctgcgccgccgccagaacaaccccatcctcaccggcgaggccggcgtcggc
aagacggccgtggtcgaaggcttcgcacagcgcgtggtgcagggcgacgtgccgcccgcg
ctgcgccaggtgtcggtgcgctcgctcgaccttgcgctgctgcaggccggcgcgggcgta
aagggcgagttcgagaaccggctcaaatcggtcattgccgaggtcaaggcctcgcccacg
ccggtgatcctgttcatcgacgaggcgcaccagctcatcggcgcgggcggcgccgagggc
cagggcgacgcggccaacctgctcaagcccgcgctggcgcgcggcgagctgcgcaccatt
gccgccaccacctgggccgagtacaagaaatacgtggagcgcgatccggcactggcacgg
cgcttccaggtcgtgaagatcgaggagccgagcgaagaagtggccatcgacatgctgcgc
ggcatggtcgaaacgctggagaagcaccacggcgtggagatcgtcgacgacgccgtgcgc
gaggccgtcaagctctcgcaccgctacatcaccggccgccagttgcccgacaaggccatc
agcgtgctcgacaccgcctgcgcgcgggtggccatcgggcagaacgggctgccggccgaa
ctcgaatcggccgcgcgcgacatcgccacgggcgagagcgaactgcgcgtgctgcgccac
gaagccgccaccggcggcgaccaccaggacgccatcgccacgctcggcgcgcggctcgat
acgctgcgccagaagcacaagcgcctgtccgacaaagtcgacgaggagaagcacgcggtg
atggaaatcgtcgcgctgcgccgcaagatttccgacagcctgcgcgacaacgcaccaccg
cccgacgaggagaacgaccccgcgctgctcaccgccgcgctgcgccgcctcgagaaaggc
ctggaagctctgcagagcgacgagcccatggtgcccgtttgcgtcgacggcgtgatggtg
gccgaagtcatctcgggctggaccggcattccggtcggcaagatgatgaccgacgagctg
cacacggtgctcaacctgaaagagaagctcgccgagcgcgtggtcgggcaagacgacgca
ctcgacgccatcgcgcggcgcgtgcgcaccttccgcgccgacctcgacgaccccggcaag
cccgtgggcgtgttcatgctggtgggccccagtggcgtcggcaagaccgagacggccttt
gcgctggccgacctgctgtacggcggcgagcgcaatgtcatcaccgtgaacatgtcggag
ttccaggaggcgcacaccgtctccagcctgaagggcgcaccacccggctacgtgggctac
gggcgcggcggcgtgctgaccgaggccgtgcgccgccgcccctacagcgtggtgctgctc
gacgaaatggagaaggcccatcccgacgtgctggagctgttcttccaggtgttcgacaag
ggcaccatggaggacggtgaaggcgtgcagatcgacttcaagaacacgctgatcctgctc
acctccaacgccgcgcaggacgtgatcacgcaggcctcgcagggcgggcgcaggcccgac
cccgaggagctggtggagcggctgcgccccgagttgctcaagcagttcagcccggccttc
ctgggccgtctggcgctggtgccgtatcaccacctgggcgacgaacagatccgctcgatc
gcgaacctcaagctcggcaagctggcgcggcgctttgcgctgaaccaccacgccgccttc
acctgggacgtgcaggtggaagacgccatcaccgcgcgctgcaccgaggtggacagcgga
gcccgcaacatcgaccacatcctggcccatgcggtgctgcccgaactctcgcgccaggtg
ctggagcgcatctcgatggccgccgcgttcaccgcggtgcacatgggcatggacggcgac
ggcgccttcgccttccgcttcgagccggcaacgctgagctga

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