Variovorax sp. PAMC26660: H7F35_04270 Help Entry H7F35_04270       CDS       T10234                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism vaz  Variovorax sp. PAMC26660 Pathway vaz03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vaz00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     H7F35_04270  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vaz02044]     H7F35_04270 Secretion system [BR:vaz02044]  Type VI secretion system   Imp/Vas secretion system core components    H7F35_04270 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N Motif Other DBs NCBI-ProteinID:  QNK68949 UniProt:  A0A7G8VLF6 LinkDB All DBs Position 909312..913391 Genome browser AA seq 1359 aa AA seqDB search MLTDQLFLISIAVLTLVVLLVLGMVLYFAARRSHAKPSSDPKVARIRFDSLRSSFRQAVE LIEGNIASRADRYGIPWIMVLNEGDDHRQLPIEQSGVASALSTESASAATTQGISWHFFD RGVVIDIQGAYLGSPDDDDASEKPWDEFLGMCRAYRPQRPFDSVVITIPAALLLDDSTDG RLELSKRAKLAHRRLWLAQNRFAMRFAVYVLITGAEQLEGFSAFASALPEPLRASMLGWS SPYDLSTTYQPGWVDEAVGTVVRTVSDVSAELFATDTAPQGAGPQLLLPSRIEALRGQLQ LYVDELMRPSAYHEPFFFRGIYLTGDSGESAQAVAAIDAERDTYGRQEPASDDLIAQLMR QPAFLRDLFEKKIFLEYGLTRPSRTQTLARPVLHRALRWTAVIFLGGWGIGLVVATWQLH RHNTTLVSALSQLQHDAQYRMRALQRGEAIPTAWYRNKALSLLAMNERLRTDGTYSFFMP GSWQPFDDLNERVIERIEREFGDIAVSTLRRELMARVSQLSGVEQDEATGEFIVGANCSL PPSFKTIGDAPRKNGLLVEDQPEFGALQRYLGSAEQLDTALQAVERLRQPSTGNAEDLRV AVRYALGAELPADLSRNLRYFRQAAEGKALAIPLTPVQAALRCALDKGTAQLDARLFVNN ELLVSEQSLARLLPSLASAGTFARTTASYREVIAAIKDQEDLVASGKGGWMRQPVLVLGA SYDRTIARIEQNRLLGQEPADAVRSRAQDAFQKFRAEFNLRFGGAQPGLVWQDKEGRFAL APERIALRDALTALLAQPFMAAARDRDLPAAGMRPMAGWDLSRLDQALAIGDIRKRYMTD GMQAFPATVRPGIESALNAHFAQLVVDQVAEAATGTSEGMRPASGALMATDTQAASYEAS RQRLAKVQALLYELGAGPRAEDLRALMSRDALQRLEGVDEAFNQSELYAMRGRDFQGWRG ERGPMLVAFGVSDAGSLAAYLGQQFSRTETLGKLADGYIAALDGAGAGSVLAQRWQAINR DLERYRLKNPNSSLLLLEQFLGTTGAEIDRETCAAKLAGKAPAARIGDYFADRHQQIYSA LLARCYELQFGDQQELWTQFSARFNRSLAGRHPFGAATTARAFDLADPADVNDLARAFDP LARALKESRAEGGVRTAAMPGAAARRFADQFGRARDFLSPLFPTEDGATPGYDLSVDFRA NTMAEIEGNKIIDWSFEVGDQVLKQRDAPRTLRWEYGMPVALVLRIAKDSPVVARADPQQ PALLTDGQSVSFRFADPWALLTLAQRQREGDASQRPDGRTQLLKFEFPLVAQSAGDAAQT PAGGRARVFLRVAASPAGKKTALIWPAAFPARAPEWNTP NT seq 4080 nt NT seq  +upstreamnt  +downstreamnt atgctgacagaccagctcttcctcatttccatcgcggtgctgacgctggtggtgctgctc gtgctgggcatggtgctgtactttgcagcgcgccgctcgcacgccaaaccttcgagcgac ccgaaggtcgcgcgcatccgcttcgattcgctgcgcagttccttccgccaggccgtcgag ctgatcgaaggcaacatcgcctcgcgcgccgaccgctacggcatcccgtggatcatggtg ctcaacgagggcgacgaccaccggcagttgcccatcgagcagtcgggcgtggcgagcgca ctgagtaccgaatcggcctcggccgcgaccacgcagggcatttcgtggcacttcttcgac cgtggcgtcgtcatcgacatccagggcgcgtacctcggctcgcccgatgacgacgatgct tccgagaagccgtgggacgagttcctgggcatgtgccgggcctaccggccgcagcggccg ttcgactcggtggtcatcaccattccggcagcgctgctgctcgacgacagcaccgacggg cggctcgaactctccaagcgcgccaagctcgcacaccgccgcctgtggctcgcgcagaac cgcttcgcgatgcgcttcgcggtgtatgtgctgatcaccggcgcggaacagctcgaaggc ttcagcgccttcgcgagcgccctgcccgagccgctgcgcgcgagcatgctgggctggtcg tcgccttacgacctgtcgaccacctaccagccgggctgggtcgacgaagcggtgggcacg gtggttcgcacggtgtccgacgtgtcggccgagctttttgccaccgacaccgcgccgcag ggcgcaggtccgcagctgctgctgccctcgcgcatcgaggcgctgcgcggccagttgcag ctgtacgtcgacgagttgatgcgcccgagcgcgtaccacgagcccttcttctttcgcggc atctacctgaccggcgacagcggcgaatcggcacaggccgttgccgccatcgacgccgag cgcgacacctacggccggcaggagcccgccagcgacgacctgatcgcgcagctgatgcgc cagccggcgttcctgcgcgacctgttcgagaagaagatctttctcgagtacggcctcacg cggccgtcgcgcacgcagaccctggcgcgcccggtgctgcaccgcgcgctacgctggacg gcggtgatcttcctcggcggctggggcatcggcctggtggtggcgacatggcaactgcac cggcacaacaccacgctggtgtcggccctgtcgcagttgcagcacgacgcgcaataccgc atgcgtgcgctgcagcgcggcgaagccattccgaccgcgtggtaccgcaacaaggcgctg tcgctgctggccatgaacgagcggctgcgcaccgacggcacgtactctttcttcatgccc ggctcgtggcagcccttcgacgacctgaacgaacgcgtgatcgagcgcatcgagcgggag ttcggcgacatcgccgtgagcacgctgcggcgcgagctgatggcccgcgtgagccagttg agcggcgtggagcaggacgaagccaccggcgagttcatcgtcggcgccaattgcagcctg ccgccgagcttcaagaccatcggcgacgcaccgcgcaagaacggcttgctggtggaagac cagcccgagttcggcgccctgcagcgctacctgggttcggccgaacaactcgacaccgcg ctgcaggcggtggagcgcctgcgccagccatccaccggcaatgcggaagacctgcgcgtg gccgtgcgctatgcgctgggcgccgagctgccggccgacctgagccgcaacctgcgctac ttccgccaggcggccgagggcaaggcgctggcgattccgctgacgccggtgcaagccgcg ctgcgctgtgcgctcgacaagggcaccgcacagctggacgcgcggctgttcgtcaacaac gagctgctggtgtccgagcagtcgctggcacggctgctgccgtcgctcgccagtgccggc accttcgcgcgcaccacggcgagctaccgagaagtgatcgccgccatcaaggaccaggaa gacctggtggcctcgggcaagggcggctggatgcgccagccggtgctggtgctgggcgct tcttacgaccgcaccattgcgcgcatcgagcagaaccggttgctgggacaggagccggcc gatgcggtgcgcagccgcgcgcaggacgcgttccagaaattccgcgccgagttcaatctg cgcttcggtggcgcgcagcccggcctcgtgtggcaggacaaggaaggccgcttcgccttg gcgcccgaacgcatcgcgctgcgcgacgcgctcaccgcgctgctggcgcagcccttcatg gcggccgcgcgcgatcgcgacctcccggccgcgggcatgcgcccgatggccggatgggac ttgtcgcggctcgaccaggcgttggccatcggcgatatccgcaagcgctacatgaccgac ggcatgcaggcctttccggcaacggttcgcccgggcatcgagagcgcgctgaatgcgcac ttcgcgcagctggtggtcgaccaggtggccgaggccgcgaccggcacgagcgagggcatg cgccccgcatcgggcgcgctgatggccacggacacgcaggccgcatcctatgaagcctcg cgccagcgcctggccaaggtgcaggcgctgctgtacgagctgggcgcgggcccgcgcgcc gaagacctgcgcgcgctgatgtcgcgcgatgcgctgcagcgcctcgaaggcgtggacgaa gccttcaaccagtcggagctgtacgccatgcgcgggcgcgacttccagggctggcgcggc gagcgcgggccgatgctggtggccttcggtgtctcggacgcgggctcgctcgcggcctac ctgggccagcagttcagccgcaccgaaacgctgggcaagctggccgacggctacatcgcg gcgctcgacggcgcgggtgcgggctcggtgctcgcgcagcgctggcaggcgatcaaccgc gacctggagcgctaccggctgaagaacccgaacagcagcctgctgctgctcgaacagttc ctgggcacgaccggcgccgagatcgatcgcgagacctgcgccgccaagctggccggcaag gcaccggcggcgcgcatcggcgactactttgccgaccgccaccagcagatctacagcgcc ctgctcgcgcgctgctacgagctgcagttcggtgaccagcaggaactgtggacgcagttc tccgcgcgcttcaaccgctcgctggcgggccggcatccgttcggcgcggccaccacggcg cgcgccttcgacctggccgatccggcggacgtgaacgacctggcgcgggccttcgacccg ctggcgcgcgcactgaaggaaagccgcgcggagggcggcgtgcgcaccgccgccatgccg ggtgcggccgcgcgccgcttcgccgaccagttcggccgcgcgcgcgacttcctgtcgccg ctgttcccgaccgaggatggcgccacgccgggctatgacctgagcgtggacttccgcgca aacaccatggccgagatcgagggcaacaagatcatcgactggtccttcgaggtcggcgac caggtgctcaagcagcgcgatgcaccacgcacgctgcgctgggaatacggcatgccggtg gcgctggtgctgcgcatcgcgaaggactcgccggtggtggcgcgcgccgatccgcagcag cccgcgctgttgaccgacgggcagagcgtgagcttccgttttgccgatccgtgggcgctg ctcacgctggcgcagcgccagcgggaaggtgatgcgtcgcaacgcccggacggccgcacg cagctgctgaagttcgagtttccgctggtggcccagtcggccggcgacgcggcgcagacg ccggccggcggtcgcgcgcgcgtgttcctgcgcgttgcggcaagccccgccggcaagaag accgccctgatctggcccgccgcgttccccgcacgcgctcctgaatggaacacgccctga

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