Variovorax sp. PAMC26660: H7F35_05045
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Entry
H7F35_05045 CDS
T10234
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
vaz Variovorax sp. PAMC26660
Pathway
vaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7F35_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vaz03019
]
H7F35_05045
Messenger RNA biogenesis [BR:
vaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H7F35_05045
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QNK71447
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Position
1064577..1065236
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AA seq
219 aa
AA seq
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MLDRDGFRPNVGIILLNQRNQVFWGKRIRTHSWQFPQGGIDRGESPEQAMFRELHEEVGL
HPEHVRIVARTRDWLRYEVPDRFIRRDARGHYKGQKQIWYLLQLVGHDWDLNLRATDHPE
FDAWRWHDYWVPLEVVVEFKRGVYEMALTELARYLPRQDFRNRFLRSNVRAREFERHPAA
PGHEPNFELPPGASFDPDPNAKLANDAPLPPNGSYHAPR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgggacggcttcaggcccaacgtcggcatcatcctgctcaaccagagaaac
caggttttctggggcaaacgcatacgcacacattcctggcagtttccgcaaggcggcatt
gatcgcggcgaaagtcccgaacaagccatgttccgggaactgcatgaggaagtggggctc
catccggagcatgtgcgcatcgtggcccgtacccgcgactggttgcgctacgaggtgccg
gatcggttcatccgccgtgacgcacggggccactacaagggccagaaacaaatctggtat
ttgctgcaactcgtcggccacgactgggatctcaacctgcgtgccaccgaccatcccgaa
ttcgatgcatggcgctggcacgactactgggtgccgctcgaagtcgtcgtcgagttcaag
cgcggcgtctacgagatggcgctgaccgagcttgctcgctacctgccgcggcaggatttc
cgtaaccgtttcctgcgcagcaacgtgcgcgcccgagagttcgagcgccatcctgccgcg
ccaggccatgaacccaatttcgagctgcctccaggcgcaagcttcgacccggaccccaat
gccaaacttgcgaacgacgcccctctcccgcccaacggctcttaccatgcgccgcgttga
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