Variovorax sp. PAMC26660: H7F35_06835
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Entry
H7F35_06835 CDS
T10234
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vaz Variovorax sp. PAMC26660
Brite
KEGG Orthology (KO) [BR:
vaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vaz03016
]
H7F35_06835
Enzymes [BR:
vaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
H7F35_06835
Transfer RNA biogenesis [BR:
vaz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
H7F35_06835
Prokaryotic type
H7F35_06835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QNK69410
LinkDB
All DBs
Position
complement(1422872..1423828)
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AA seq
318 aa
AA seq
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MMKLTFLGTSSGTPTRNRNVSGLAVQTVLGADWFLIDCGEGTQHRLLQTPLSMHDMAAVC
ITHVHGDHCYGLPGLLASAGMGKRMKPLKLIAPLPVWEWFQATRQLTDLHLPYEVEHVDV
EAQPLVYEAPGLRIERHVLRHRVPSHAYRVQVQTRRVRLKADALRALGFPPGPAWRALQT
GEDVPFNGAVLRSADFTETQIDTASAVIGGDNAEPALLRAACEGAQLLVHEATYTQEVLD
KVGPGPMHSSARLLAEFAQSVEVPNLVLTHFSARHQNEEGMRELMTETQAPYRGNAFLAN
DLDVFELDSAGKVTVTRA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaactgacttttctgggaacctcttcaggcactcccacgcgcaaccgcaacgtc
tccggcctcgccgtgcagacggtgctcggcgccgactggttcctgatcgactgcggcgaa
ggcacgcagcaccgtctgctgcaaacgccgctgtcgatgcacgacatggccgccgtttgc
atcacgcatgtgcacggtgaccattgctatggcttgccgggtttgctcgcgagcgcgggc
atgggcaagcgcatgaagccgttgaagctgatcgcgccgttgccggtgtgggaatggttc
caggccacgcgccagttgaccgacctgcacctgccctacgaggtcgagcatgtggatgtc
gaagcgcaaccactggtgtacgaagcacccggcctgcgcatcgagcgccacgtgttgcgc
catcgcgtacccagccacgcctaccgtgtgcaggtgcaaacccggcgcgtccggctgaag
gccgatgcgctgcgtgcgctcggttttccgcccggcccggcatggcgtgcgctgcagacc
ggcgaggacgtgcctttcaacggcgcggtgctgcgcagtgccgatttcacggagacgcag
atcgacacggccagcgcggtgattggtggcgacaacgccgagcccgcgctgctgcgtgct
gcctgcgaaggcgctcaactgctggtgcacgaagccacgtacacgcaggaagtgctcgac
aaggtcggccctggcccgatgcacagctcggcgcgcttgctggccgagtttgcgcaatcc
gtggaagtacccaaccttgtgctgacgcatttcagcgcacgacatcagaacgaagagggc
atgcgggaactgatgacagagacccaggccccctaccgaggcaatgcattcctggccaac
gacctggacgtgttcgaactcgacagcgccggcaaggtgaccgtcacccgcgcctga
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